Lactobacillus iners: GYK47_03580
Help
Entry
GYK47_03580 CDS
T08045
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lid
Lactobacillus iners
Pathway
lid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYK47_03580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lid03400
]
GYK47_03580
Enzymes [BR:
lid01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GYK47_03580
DNA repair and recombination proteins [BR:
lid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYK47_03580
Prokaryotic type
GYK47_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QIC18568
LinkDB
All DBs
Position
complement(739363..740058)
Genome browser
AA seq
231 aa
AA seq
DB search
MKKFIGNDWDQILDPIFESDRYQQLHEFIKHEYSTKVIYPDMYHIYTAFKLTPFYKTKVV
ILGQDPYHNPQQATGMSFSVNPGVALPPSLRNIYKELHNDVGAKIVNHGYLKKWADQGVL
LLNAVLTVPYGKANGHQGKGWEFVTDQAIKSLSDRGGVVFILWGKFAQNKIPLIDVNKNF
ILKSAHPSPLSASYGFFGSHPFSKCNELLKKLGQSPIDWQLPESVAPNDVV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttattgggaatgattgggatcaaatattagatcctatatttgagagtgat
aggtatcaacaattacatgaatttatcaagcatgaatatagtactaaggtaatttatcca
gatatgtatcacatttatacagcatttaagctgacacctttttataaaactaaggtggtg
attttgggacaggatccatatcataatcctcaacaagcaactggcatgagttttagtgtg
aatccaggagtagcattaccgccgtcgttacgtaatatctataaagaattgcataatgat
gtgggagctaagatagttaatcatggctacttaaaaaagtgggccgatcagggtgtgtta
ttgttaaatgcagtcttgacggtcccatatggtaaggcgaatggacatcaaggaaaaggc
tgggaatttgttactgatcaagcgattaagtctttaagtgatcgaggaggagttgtattt
attttatggggtaaatttgctcaaaataaaataccactgattgatgtcaataaaaatttt
attttaaaatcagcacatcctagtccactatctgctagttatggattttttggctcgcat
cccttttctaaatgtaatgaattattaaaaaaattagggcaaagccctatagattggcaa
ttaccagaatcggttgcacctaatgatgttgtttaa
DBGET
integrated database retrieval system
