Lactobacillus iners: GYK47_03785
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Entry
GYK47_03785 CDS
T08045
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
lid
Lactobacillus iners
Pathway
lid01100
Metabolic pathways
lid01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
GYK47_03785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lid03400
]
GYK47_03785
Enzymes [BR:
lid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
GYK47_03785
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
GYK47_03785
DNA repair and recombination proteins [BR:
lid03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
GYK47_03785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
MobC
Motif
Other DBs
NCBI-ProteinID:
QIC18599
LinkDB
All DBs
Position
complement(781907..782863)
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AA seq
318 aa
AA seq
DB search
MNTFDEIFKKINDYSTIIIHRHQHPDPDALGSQAGLARSLKLAFPEKKILCAGGPEGDLA
WINKMDEVKDEDYQGALVITVDTANTPRISDDRFRMGDFLIKMDHHPDVDPYGDLRYVEP
EKPAAAEIIFDFIKAEKLPLTKEVAYPIYAGMVGDTGRFMYAETTPATLKAAYELAATGI
DITEIAMNISTVTLEQAKLQNSVIDLLHVDPCGAAYAVVTQQQLHKLGINEDQASATIGT
PGRIKGIIAWNIFVEKADGTYRVHYRSKGPIINQLAEQHNGGGHALASGANAVDMKEVEQ
IFAEVVEVTKKYNENANE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatttgatgaaattttcaaaaaaataaatgattattcaactataataattcat
cggcatcagcatccagatccagatgctttaggatcacaagctggattagcacgtagtctt
aagttggcttttcctgaaaaaaagattctctgtgctggtgggccagaaggtgatttggcc
tggattaataaaatggatgaggttaaagatgaagattatcaaggtgcattagttattact
gtcgatacggctaatactccgaggatctcagatgatcgttttaggatgggcgacttttta
attaaaatggatcatcaccctgatgttgatccttatggtgatttacgttatgtagaacca
gaaaagcctgcggctgctgaaatcatctttgattttattaaagcagaaaaattaccttta
actaaggaagttgcttatccaatttacgctggtatggtaggagatactggtcgttttatg
tatgcagaaactactcctgcaacattaaaagccgcctatgaattagctgctacaggaatt
gacattaccgaaattgctatgaatatttcaacagttacattagaacaagcaaaattgcaa
aattcagtaatagatttattgcatgtcgatccttgtggagctgcttatgctgtagttact
caacaacaattgcataagttggggattaatgaagatcaagcttcagctactattggtacc
cctggtcgtattaaagggattattgcttggaatatttttgtcgaaaaagctgatggaacg
tatcgtgttcattatcgttccaaagggccaattattaatcaattagcagaacaacacaat
ggtggtggacatgcacttgctagtggagctaatgcagttgatatgaaagaagttgagcaa
atttttgcggaagttgttgaagtaacaaagaaatataatgaaaatgcaaatgaataa
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