Lactobacillus iners: GYK47_03860
Help
Entry
GYK47_03860 CDS
T08045
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lid
Lactobacillus iners
Pathway
lid00220
Arginine biosynthesis
lid00240
Pyrimidine metabolism
lid00250
Alanine, aspartate and glutamate metabolism
lid01100
Metabolic pathways
lid01110
Biosynthesis of secondary metabolites
lid01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GYK47_03860 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GYK47_03860 (carB)
00220 Arginine biosynthesis
GYK47_03860 (carB)
Enzymes [BR:
lid01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
GYK47_03860 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
MGS
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QIC18611
LinkDB
All DBs
Position
complement(799488..802655)
Genome browser
AA seq
1055 aa
AA seq
DB search
MPKRKDIHKIMVIGSGPIIIGQAAEFDYSGTQACLALREEGYEVILVNSNPATIMTDTEI
ADKVYLEPLTVEALTRIIYQEYPDAILPTLGGQNGLNMALALSKTGILDKLNIELLGTKL
KSIEQAEDREEFKKLCKQLGEPVPPSLTVHNAEDALAFAEKIGYPIIVRPAFTMGGTGGG
ICNNRKELATVVARGLDLSPVTECLIEKSIAGYKEIEFEVMRDCTDNCMIVCCMENFDPV
GIHTGDSIVFSPSQTLSDKEYQMLRDCSLNLIRALKIEGGCNVQLALNPNSFDYDVIEVN
PRVSRSSALASKATGYPIAKMAAKIAVGMTLDEIINPVTGTTYAEFEPALDYVVCKIPRW
PFDKFAQADRKLGTQMKATGEVMAIGRTAEEALHKAIRSLDIDELDLFSPEAHNADDNLL
EKKLAYAQDDRLFYLAEAIRRNYSMKDIHELTKINYYFLDIVAHLVEMEKTIQDHPQDIA
TLREAKKYGFSDLTIAHLWNITENEVRQFRKQNHIIHVYKMVDTCAAEFESQTPYFYSTY
DEENESTDFDSKSVIVLGSGPIRIGQGVEFDYATVHCVKALQKLGYKAIVINSNPETVST
DFSISDKLYFEPITLEDVLNIVDIEKPEGVIIQFGAQTAINLAAGLKEHGVKILGTDVED
INRAEDREEFDQVIKNLGLKQPKGLTATTRQGVIDAAIKIGYPVLVRPSYVLGGKAMEIV
YNEAELEEYLDNNAYITNDHPILVDDYLDGKECDVDAISDGVDILIPGIMEHVEHAGVHS
GDSMAVYPPQSFSDDIQQKICEVTRKLAIALKCQGIMNIQFIVRDNDVYVIEVNPRASRT
VPFLSKITGIEMVQVATKIIMGKSLAEQGYKPGLAPASQMINVKAPVFSFNKLPGVDPYL
GPEMKSTGEVMGSDYTYAKALYKAFAGAKINLTANMSILLATDLKEKDRIVAIAKKFNQT
GARVFVLPEVAEVLQDMGVRFNLVESEETLMQMLKEKKFNLVINNMSRDSEPESIGFKLR
QMAISQNISLITALDTVDAILIAISNDTLTTKPLA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagaaaagatattcataagataatggtaatcggatctggcccaattattatt
gggcaggctgcagaatttgattattcaggaactcaggcatgtttagcactgcgagaagaa
ggttatgaagttattttagttaattccaatccagcaacgattatgactgatacagaaata
gcggataaggtttatttggaaccattaactgtagaagcattaactagaatcatttatcaa
gaatatccagatgctattttgccaactttaggcggtcaaaatggtttgaatatggcgtta
gcgttatctaaaacgggaattttggataaattaaatattgaacttttaggcacaaaatta
aaatctattgaacaagctgaagaccgtgaagaatttaagaaattatgtaagcaattagga
gaaccagtgccgccatcattaactgtacataatgctgaagatgctttggcttttgctgaa
aaaattggatatccaattattgttcgtcctgcttttacaatgggtggtactggtggtggt
atttgcaacaatcgtaaagaattagcaacagttgtggctagaggattagatttatcacca
gtaactgaatgtctaattgaaaaatcaatcgctggttacaaagaaattgaatttgaagtt
atgcgtgattgtacagataattgtatgattgtttgttgcatggagaattttgatcctgta
ggtattcatacaggtgattcgattgtattttcgccttcacaaactttatctgataaagaa
tatcagatgttacgtgattgctcattgaatttaattcgagctttaaagatagaaggtgga
tgtaatgtgcaattagctttgaatccaaatagctttgattatgatgtgattgaagttaat
ccgcgtgtctcacgttcctcagctcttgcctccaaagctactggctatccaattgctaaa
atggctgccaaaattgctgtagggatgactttagatgaaattatcaatcctgttactggt
acgacttatgcagaatttgaaccagcactagactatgtcgtttgcaagatacctcgctgg
ccttttgacaagtttgcccaagcagatcgtaaattaggtacgcaaatgaaagctactggt
gaagtgatggccataggtagaactgcagaagaggctttgcataaagcaattcgttcttta
gatattgacgaattagatttgttttcgccagaggctcataatgcagatgataatttgcta
gaaaagaaattagcttatgcacaagatgatcgtttattctatctagcagaagctattcgt
cgtaactatagcatgaaagatattcacgaattaaccaaaattaattattactttttggat
attgtggctcatctggtggaaatggaaaaaacaattcaagaccatcctcaggatattgct
actttgcgtgaagctaaaaagtatggttttagtgacctgacgattgctcatttgtggaat
ataactgaaaatgaagttcgccaatttagaaaacaaaatcatatcatccatgtttataaa
atggtggatacatgtgctgctgaatttgagtcgcaaacaccatatttttatagtacttat
gatgaagaaaatgagagcactgactttgatagtaaatcagtaattgttttggggtctggt
ccaattagaataggtcagggtgtcgaatttgactacgctactgtacattgtgttaaagcg
ttacaaaaactaggatataaggcaatagtaattaattctaatcctgaaacagtttcaact
gacttctcaatttcagacaagttatattttgaaccaattactttagaagatgtattaaat
attgtagatattgaaaagccagaaggagtgatcattcaatttggtgctcaaactgccatc
aatttagcagctggtttgaaagaacatggtgtcaaaattctaggaactgatgttgaagat
attaatcgggcagaagatagagaagaatttgatcaagttattaaaaacttaggcttaaaa
caaccaaaaggcttgactgcaaccaccagacagggagtaattgatgctgcaattaagatt
ggttatccagtattagtacgaccatcttatgttttaggtggtaaggccatggaaattgtc
tataatgaagcagaattagaagaatacttggataataatgcctacattactaatgatcac
ccaattttagtagatgattatctagatggtaaagaatgtgatgttgatgccattagtgat
ggtgttgatattttgattccgggtattatggagcatgtagagcatgctggcgtacattct
ggagactcaatggctgtttacccaccacaaagcttttcagatgatattcaacaaaagatt
tgtgaagttactcgcaaattagccatcgccttaaaatgtcaaggaattatgaatatccaa
tttattgtcagagataatgatgtttacgtcattgaagttaatcctcgtgctagcaggaca
gtaccatttttaagtaagatcactggtattgaaatggtgcaagtagctactaagattatt
atgggcaagagtttagcagaacaaggatacaagccaggcttagctcctgctagtcaaatg
attaatgttaaagcaccagtcttctctttcaacaaattaccgggtgttgatccatactta
ggaccagaaatgaaatcgactggtgaagttatgggtagcgattatacttatgctaaagca
ttatataaagcatttgctggtgcaaaaattaatctgactgctaatatgagtattttgcta
gctactgatttaaaagaaaaagatcggatagtagcgattgctaagaaatttaatcaaact
ggagccagagtgtttgtcttaccagaagtagctgaagtattgcaagacatgggtgtacgt
ttcaatttagtcgaatctgaagaaaccttgatgcaaatgttaaaggagaagaagtttaac
ttagtaatcaataacatgtcacgggatagtgaaccagaatctatcggctttaaactaaga
caaatggcgatatcacaaaatattagtttgataacagctttagatacagtcgatgcaatt
ttgatagctatctctaacgatactttgacaacaaaacctttggcataa
DBGET
integrated database retrieval system
