Lactobacillus iners: GYK47_04095
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Entry
GYK47_04095 CDS
T08045
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lid
Lactobacillus iners
Pathway
lid03030
DNA replication
lid03430
Mismatch repair
lid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYK47_04095 (dnaX)
03430 Mismatch repair
GYK47_04095 (dnaX)
03440 Homologous recombination
GYK47_04095 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lid03032
]
GYK47_04095 (dnaX)
03400 DNA repair and recombination proteins [BR:
lid03400
]
GYK47_04095 (dnaX)
Enzymes [BR:
lid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYK47_04095 (dnaX)
DNA replication proteins [BR:
lid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GYK47_04095 (dnaX)
DNA repair and recombination proteins [BR:
lid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GYK47_04095 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
TIP49
RuvB_N
AAA_22
DNA_pol3_gamma3
AAA_30
AAA_5
AAA_19
Rep_fac_C
AAA_assoc_2
AAA_14
AAA_7
AAA_2
AAA_16
RNA_helicase
ATP-synt_F
Sigma54_activ_2
DUF6395
Motif
Other DBs
NCBI-ProteinID:
QIC18644
LinkDB
All DBs
Position
complement(862838..864589)
Genome browser
AA seq
583 aa
AA seq
DB search
MAYQALYRRWRPRTFEAVVGQSAICDTLRNSIKRHKISHAFLFSGPRGTGKTSCAKIFAK
AINCMDSKDGEPCNQCSNCLAADKGILNDIIEIDAASNNGVDEIRAIRDKVKYAPTQGYY
KVYIIDEVHMLSIGAFNALLKTLEEPPEHVVFILATTELQKVPATIISRTQRYNFKRISN
DQLVARMKFILDQEKIAYDEKSLQVIAQVADGGMRDSLSILDQILSYDQAKINYQDTLAI
TGYADQVKIEALFLDLLNKKTSQALEEVEELLNNGASAKNILDEIINLVVKAMLAIKGDT
TVTFLSANYLEQLRLISTQVLSQTLQLANDALNSLRYTNQQQIPLKVFVVRISTQDVNAT
VSQTDAAEIKQLQTKVEQLSLQVAELLKKANTSAIAKPSEILTEIKDKVRPTKAVNPSVA
TLKKKKTGLQLSTEANLKKVNVVLSQATKQDLNTIKDVWQQDMSSLLEVSQRALLEVLEP
VAASPTQVVLKCKYEFWFERAMADENFISQLENNLEKLTQHKYQIVLVSEKSWTTIRQEY
VKKYKEHLIIAQRELASNPNEEVIKKAKSLFGDLVNVKDDSDL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcattatatcgtaggtggcgaccacgtacttttgaggcagtagttggt
caaagtgctatttgtgatacattaagaaattcaattaaacgtcataaaatttcacatgct
tttttattttctggcccgagaggaactggaaaaacatcatgtgccaaaatttttgccaaa
gccattaattgtatggactctaaagatggtgagccatgcaatcaatgttctaactgttta
gcagcagataaaggtatattgaatgatattattgaaattgatgctgcttcaaataatggt
gtggatgagatccgtgctatccgtgacaaagtaaaatatgcaccaacgcaaggttattat
aaagtttatattatcgatgaagtgcatatgttgtcgataggtgcgtttaatgcattactt
aaaactttggaagaaccacccgagcatgttgtttttattttagcaactacagaattacaa
aaagttccagcaacaataatttcacgtacgcaaagatataattttaagcgaatttctaat
gatcaattagttgctaggatgaaatttattcttgatcaagaaaagattgcatatgatgag
aagtcattgcaagtcattgctcaggtagcggatggtgggatgcgagattctttaagcatt
ttagaccagattctgtcgtatgaccaagctaaaattaattatcaagatacattggcaatt
actggttatgcagatcaagttaaaattgaagccctatttttagatttattaaataagaaa
acaagtcaagctctagaagaagttgaagaattactaaataatggtgcatcggcgaaaaat
attttagatgaaattatcaatttggttgttaaagctatgttagcaatcaaaggtgatact
acagtcacttttttatctgccaattatttagaacaattacggctaatatcgacgcaagta
ttgagtcaaacattgcaattggctaatgacgcattaaatagtttgcgatatacgaatcaa
cagcaaattccattaaaagtttttgttgtgcgaatttcgacacaagatgtaaatgcgacc
gtcagtcaaactgatgcagctgaaataaagcagctacaaactaaagtagaacaattaagt
ctgcaagttgctgaattgctaaaaaaagccaatacttctgctatagctaaaccatcagaa
atattgactgagataaaagataaagttagacctacaaaagctgttaatccaagcgttgcg
actttaaagaaaaagaaaacaggactgcaactttcaactgaagctaatttaaaaaaagtt
aatgttgttttgtcgcaagctactaaacaagatttaaatacaatcaaggatgtttggcag
caagatatgtcatcattgctagaagttagtcaaagagctctacttgaggttttggaaccg
gtagcagctagtccaacgcaagtagtcttaaaatgcaaatatgagttttggtttgagaga
gctatggctgatgagaattttattagtcagttggaaaataatttagaaaagctgacacaa
cataaatatcaaattgtgctagtatctgaaaagtcctggacaacaattcggcaagaatat
gtcaagaagtataaagaacatctcataatagctcaaagagaacttgcaagtaacccaaat
gaagaagttataaaaaaagcaaaatcactatttggtgatcttgttaatgttaaagatgat
tctgatttataa
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