Lactobacillus iners: GYK47_04285
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Entry
GYK47_04285 CDS
T08045
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lid
Lactobacillus iners
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lid03019
]
GYK47_04285
Messenger RNA biogenesis [BR:
lid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GYK47_04285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QIC18677
LinkDB
All DBs
Position
complement(903357..904334)
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AA seq
325 aa
AA seq
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MKKKLVTYNDGESMDIIVLIKDAILRKNKKNEPYLVLIFSDGDSYIRGNLWNVADDDVAK
YVAGTFVQLNGIKEKFQNHYQIKILSMQTVGSSEVTNITDFTEKSYIDVNELVSELKDGI
LEINNPIWKSIVSFLVDKWYQKFIDFPAGKSNHHACKGGLLLHTVTMLKLAVAISKIYPQ
VNHSLLYAGCILHDLGKVIELSGPVATKYTVEGNLLGHLVIIDEQIILAAKELKIKEYDE
DLVLLRHMVLSHHGLPEYGAARRPAILEAELLHKIDDMDATVYAITRSLQRTEPGTFTEL
ISSQDNRRFYRPIDSSDLNKINNLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaagctagttacatataatgatggtgagtccatggacataatagtcctaata
aaagatgccattttacgcaaaaataagaaaaatgaaccatatctggttttgattttttca
gatggtgattcatatatccgtggtaatttatggaatgttgcagatgatgatgtagcaaag
tatgtagcaggtacttttgtgcaattaaatgggattaaggaaaaatttcagaatcattat
caaataaaaatcttatctatgcaaactgttggctctagtgaagtgactaatataacggat
tttactgaaaaatcatacatagatgttaatgaactagttagtgaattaaaggatggtatt
cttgaaataaataatcctatttggaaatcgatagttagttttttggtagataaatggtac
caaaaatttattgattttcctgctggcaagtccaatcatcatgcctgcaaaggtggatta
ttgttacatactgtgacgatgttaaaactagcagttgccatttctaaaatctatccccaa
gttaaccattctttattgtatgcaggttgtattttgcatgatctaggtaaggttatagaa
ctgagcggacctgtggctactaaatatacagtagagggaaatttactaggacatttagtc
attatcgatgagcaaataattttagcagcaaaagaattgaaaattaaagaatatgatgag
gatttagtacttttaaggcatatggtgttatcacatcatggattgcctgagtatggtgct
gcccgtcgcccggcaattttagaggcggaattgttacataaaattgatgatatggatgct
acagtatatgctattactagatctttacagcgtactgaaccaggtacctttactgagctg
atttcatcccaagataatcgcagattctatcgtcctattgatagttctgatttaaataaa
atcaataatttagaataa
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