Lactobacillus iners: GYK47_04760
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Entry
GYK47_04760 CDS
T08045
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lid
Lactobacillus iners
Pathway
lid00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GYK47_04760 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lid01007
]
GYK47_04760 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lid03016
]
GYK47_04760 (serS)
Enzymes [BR:
lid01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
GYK47_04760 (serS)
Amino acid related enzymes [BR:
lid01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GYK47_04760 (serS)
Transfer RNA biogenesis [BR:
lid03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GYK47_04760 (serS)
Prokaryotic type
GYK47_04760 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
COG4_N
APG6_N
THOC7
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QIC18716
LinkDB
All DBs
Position
complement(970408..971718)
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AA seq
436 aa
AA seq
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MLDIKVIRENLDWAKKKLATRGIKPEELDELVAIDVKRREVLTKTETLKNKRNEVSAQIA
QAKKNKENADDAIKEMREVGQEIKALDVEVSELTEKQKYILLRLPNFPDDSDPIGPDDSY
NEEVRKWNEPTKFTFEPKAHWDLGTDLNILDWDAAAKVSGARFVYYKGAGALLERAVFNF
FLDENVKAGYTEVIPPYLVNYDSMQGTGQFPKFTEDVYTIVDNDDPDKPRELTLIPTAEV
PLVNYFRDKILDIKQLPINVTAMSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKICDEDS
SWQELDKLTKNAEHLLQKLELPYHVVALSTGDASFTSAKTYDLEVWMPAQNQYREISSCS
NCTDFQARRSLIRYRDEAGKLHLAHTLNGSGLAVGRTVAAILENYQNEDGTVNVPEALVP
YMHGMTVIKPEPKFGE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgttagatataaaagtcattagagagaatcttgattgggctaaaaaaaagttagctacc
agaggcattaagcctgaagagctagatgagttggtggctatcgatgttaagcgtcgagaa
gtattaactaaaacagagactttaaaaaacaaacgtaatgaggtttctgcacaaattgct
caagcaaagaaaaacaaagaaaatgcagatgatgccataaaagaaatgcgtgaagtcggt
caagaaatcaaagcacttgatgtcgaagtatcagaattgacagaaaagcaaaagtatata
ttattgcgtttgcctaatttcccagatgattcagatcctattggacctgacgatagttac
aatgaagaagttagaaaatggaatgaaccaactaaatttacttttgaacctaaagcacat
tgggatttaggtactgatttaaatattcttgactgggatgcagcagctaaagtatctgga
gcacgttttgtttattataaaggtgctggcgcattattagaacgagctgtatttaacttc
tttttagatgaaaatgttaaagctggttatactgaagtgataccaccttatttggttaac
tatgattctatgcagggaacaggtcaattccctaaatttacagaagatgtttataccatt
gtggataatgatgatcctgataaaccacgtgaattgacattgatacctactgcagaagta
cctttagttaactactttagagataaaattctagatattaaacaattacctattaatgtg
actgctatgagtcctgcttttagaagtgaagcaggaagtgcaggtcgtgatacccgtggc
ttaataagaatgcatgaatttagaaaagtagaaatggtaaaaatttgtgatgaagatagt
tcatggcaagaattagataaattgactaaaaatgcagaacatttgttacaaaaattagaa
ttaccatatcatgtagtagctttgtctactggggatgcaagttttactagtgccaagact
tacgacttagaagtatggatgcctgctcaaaatcagtatcgtgaaatttcaagttgttca
aattgtacagattttcaagctagaagaagtttaataagatatcgtgatgaagctggtaaa
ttacatttggctcatacattaaatggctctggattagctgtaggtagaacagttgctgct
attttagaaaattatcaaaatgaagatggtacagtgaatgtcccagaagcattagtacct
tacatgcatggtatgactgttattaagcctgagcctaaatttggtgaataa
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