Lactobacillus iners: GYK47_05965
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Entry
GYK47_05965 CDS
T08045
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
lid
Lactobacillus iners
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GYK47_05965 (rnmV)
Enzymes [BR:
lid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
GYK47_05965 (rnmV)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
DUF4435
ZnuA
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QIC18899
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All DBs
Position
1228025..1228588
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AA seq
187 aa
AA seq
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MELQNKKRFDAVVIVEGRDDTKRLKQYFPGIETIETNGSEVSQQTITTIVNIAKKRDVII
FTDPDFNGERIRKIILKAVPTAKQAFITRKEGEPTKRGNSLGVEHASKAALQRALSDLHE
VDITANAISIQQYDELGLGMGDNARKLREKVGIALGVGYGNAKQFYKRLAMFGISYNKLK
EVVKHVK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaattacaaaataaaaaaagatttgatgcagttgttattgttgagggacgcgatgat
accaaaaggttaaaacaatattttccaggcatagagactatagaaactaatggctctgaa
gtatcgcaacaaactataactactattgttaatattgctaaaaaaagagatgtaattatt
tttactgatcctgattttaatggcgagagaataagaaaaataatccttaaagcagtgccg
actgccaagcaggcatttattactcgtaaagaaggtgaacctactaagcgaggaaatagt
ttgggagtagaacatgcttctaaagctgctttgcaacgagcattatctgatttacatgaa
gtagatattacagccaatgctatttctattcagcaatatgatgagttaggactaggtatg
ggtgataatgctagaaagttacgcgaaaaagtaggtatagcattaggcgtaggatatggt
aatgctaaacaattttacaagagattggctatgtttggtattagttataataaactaaaa
gaggtggttaaacatgtcaaatag
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