Lactobacillus iners: GYK47_06155
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Entry
GYK47_06155 CDS
T08045
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lid
Lactobacillus iners
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lid03016
]
GYK47_06155 (truA)
Enzymes [BR:
lid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GYK47_06155 (truA)
Transfer RNA biogenesis [BR:
lid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GYK47_06155 (truA)
Prokaryotic type
GYK47_06155 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QIC18934
LinkDB
All DBs
Position
1249724..1250506
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AA seq
260 aa
AA seq
DB search
MQRYKLILAYDGTLFHGFQKQPNQRTIQGVIEDALLKMTKGKHVIVHGSGRTDAGVHAKG
QVIHFDYPGNVIPAKNMLLALNALMPRDIIFLDSELVNDDFHVQYSTKAKWYRYIINQSR
FTDPFRRNYTGHCPYKLDMLKMKKAATYLLGKHDFTSFAASGGQIVDKVRTIFYINLEQH
GDEIVLDVIGDGFLYNMVRIITGLLIDIGHGQKEVEDVEKIILAKNRQQVRNTAPASGLY
LYHVFYDDLPKKYNLIAKID
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatataaattaattttggcttatgatggcaccttatttcacggatttcaaaaa
cagccaaatcaacgtacgatacaaggcgttattgaagatgcattattaaaaatgaccaag
ggaaagcatgtgatagtacatggttctggtcgtacagacgctggtgttcatgccaaaggg
caggtgatacattttgattatccaggtaatgtaatcccagctaaaaatatgcttctggct
ttaaatgctttaatgccacgggatattatattcttagattctgaactggttaatgatgat
tttcatgtgcaatattcgactaaagccaaatggtataggtatattattaatcaaagtaga
tttacggatccttttagacgaaattatacaggacattgcccttataaattagatatgcta
aaaatgaagaaagccgcaacatatttgttaggaaagcatgattttacaagtttcgctgca
agtggtggtcaaatagttgataaagtaagaactattttttatattaatctagagcaacat
ggtgatgaaatcgttttagatgtcattggtgatggttttttatataatatggtaagaatt
attaccggattgctaattgatattggtcatggtcaaaaagaagttgaagatgtagaaaaa
ataattttagctaagaatcgacaacaagttcgaaatactgcaccagccagtggattgtat
ctatatcatgttttttatgatgatttacctaaaaagtataatcttattgctaaaatagat
tga
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