Lactobacillus iners: GYK47_06225
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Entry
GYK47_06225 CDS
T08045
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lid
Lactobacillus iners
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lid03400
]
GYK47_06225 (radA)
DNA repair and recombination proteins [BR:
lid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GYK47_06225 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
GvpD_P-loop
AAA_16
AAA
AAA_22
AAA_14
SLFN-g3_helicase
Lon_C
AAA_24
ABC_tran
AAA_19
KdpD
MMR_HSR1
nSTAND3
NACHT
AAA_5
RUBY_RBDX
NTPase_1
MCM
Peptidase_S30
DUF7129
DUF7125
Motif
Other DBs
NCBI-ProteinID:
QIC18946
LinkDB
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Position
1265753..1267132
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AA seq
459 aa
AA seq
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MAKLKTQYRCKNCDYVSASYLGRCPNCGAWNQLEKETEVAKTTSNRLTASRLITAIGNNE
PKKLSEIDIKKQIRITTPFSELNRVLGGGIVPGSLVLVGGDPGIGKSTLMLQIMGSISNA
HKVLYVSGEESASQIKMRAERLHISDTELLLYSETNMENIREQIVDLKPEFLVIDSIQTM
NEPSQDSMVGSATQVREVTAELLKIAKIDKITVFVIGHVTKEGAIAGPKILEHMVDTVLY
FEGDKHHSYRILRSVKNRFGATNEIGMFEMKEEGLSEVTNPSAVFLDERLPNSTGSAIVV
SLEGTRPILADIQALVTPTAFGYAKRTTSGLDYNRVALLLAVLEKRGNLMLQNQDAFLTA
TGGIKLNEPAIDLAICMAVASSYKNKEIAVTDCFVGEVGLTGEIRRINNIEARVKEAATR
GFKRIFVPKYNVSAKLQSHTTIEIVGVISLMEALKIEFT
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattaaaaactcaatatcgttgtaagaattgcgattatgtatcagcttcttat
ttaggccgttgtccaaattgcggtgcatggaatcaattggaaaaagagacggaagttgcc
aaaactacttccaatcggcttactgctagtagattaattactgctataggtaataatgag
cctaaaaaattaagtgagatagatattaaaaagcaaattcgtattactactccattttct
gaattaaatcgtgtgctgggtggtggaatagttcctggatctttagtacttgttggtggt
gatcctggtataggcaaatcaactttaatgctacaaattatggggagtatttccaatgct
cacaaggttttatatgtttcaggtgaggaatctgcaagtcaaattaaaatgcgtgcagaa
aggctacatattagtgatacagaattacttttatattctgaaactaatatggaaaatatt
agagaacagatagttgatcttaagccggaatttttagtcatcgattcaattcagacaatg
aatgagccatcgcaagattcgatggtaggatctgctactcaagttagagaagtgacagcg
gaattacttaaaattgctaaaattgataagataacagtttttgttattggccatgtgacc
aaagaaggtgctattgctggacctaaaatcttagaacatatggttgatacagtgttatat
tttgaaggtgataagcaccattcttatagaattctgcgttctgtgaaaaatcgtttcggt
gctaccaacgaaataggaatgtttgagatgaaggaggaaggactgagtgaggtaactaat
ccttctgctgttttcttagatgaaagattacctaattctactggttcggctattgttgta
tcacttgaaggaactagacctattttagctgatattcaggcactagtgactcctaccgct
tttggctatgctaagagaacaacatctggattagattataatcgagtggctttattacta
gctgttttagaaaaaaggggtaatttgatgttacaaaatcaagatgctttcttgactgct
acaggaggaattaaacttaatgaaccagctattgatttagctatttgtatggcagtagct
tctagttataagaataaagaaatagcagttactgattgtttcgttggtgaggtaggactt
actggtgagattagacgaattaataatattgaagctcgtgtcaaggaggctgctactaga
ggatttaaacgcatttttgttccgaaatataatgtatcagccaagttacaatcacacaca
actattgaaattgtaggtgtaattagtttaatggaagcattgaagattgagtttacatag
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