Leptospira interrogans serovar Lai IPAV: LIF_A0238
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Entry
LIF_A0238 CDS
T01983
Symbol
alkA
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lie
Leptospira interrogans serovar Lai IPAV
Pathway
lie03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LIF_A0238 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lie03400
]
LIF_A0238 (alkA)
Enzymes [BR:
lie01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LIF_A0238 (alkA)
DNA repair and recombination proteins [BR:
lie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LIF_A0238 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Phage_int_SAM_3
Motif
Other DBs
NCBI-ProteinID:
AER01052
LinkDB
All DBs
Position
1:275430..276116
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AA seq
228 aa
AA seq
DB search
MSSPNSSQSTNFKKRSSNVLENREVRLKKASSWLRKKDPITKKLIDSIGLCKLKTIGTPY
QVLIKSVLGQQLSVKVALTFERRLISLVGSKKIPSPEQILKIPNDEMRKIGVSQAKTETI
KRIAEAYLKRSITDSKLHKLEDSDVLKLLCSIKGVGPWTAEMVLIFALDRWDHFSINDLI
LRKSVEKHYGISKDNKKEIQLFLNTYSPYRTILSWYLWADIDGGEGWG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctccaaattcttcccaatcgactaattttaaaaaacgttcttctaacgttttg
gaaaatagagaagttcgtcttaaaaaggcatctagttggcttcgtaaaaaagacccgatt
acaaaaaaattgatcgattctattggtctttgtaaattaaaaaccattggaaccccttat
caagttttaattaaatccgttttaggacaacagctttccgttaaagttgcactgactttt
gaacgtagattgatttctttggttggaagcaaaaaaattccttcgcccgaacagattttg
aaaataccgaacgatgagatgagaaagatcggagtttctcaagccaagacggaaacgatc
aaacgtatcgctgaggcctacttaaaacggagtatcactgattctaaacttcacaaatta
gaagattctgatgttctaaaacttctttgttctattaaaggtgtggggccttggactgcg
gaaatggtgttgatttttgctttggatcgttgggatcatttctccattaatgatctcata
cttagaaaatcagtcgaaaaacactatggaatttctaaagataataaaaaggaaattcaa
ctttttttaaatacgtattctccttatagaacaattctttcctggtatctttgggcagat
attgacggtggagagggttgggggtaa
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