Leptospira interrogans serovar Lai IPAV: LIF_A0628
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Entry
LIF_A0628 CDS
T01983
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lie
Leptospira interrogans serovar Lai IPAV
Pathway
lie03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lie00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LIF_A0628 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lie03021
]
LIF_A0628 (rpoA)
03400 DNA repair and recombination proteins [BR:
lie03400
]
LIF_A0628 (rpoA)
Enzymes [BR:
lie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LIF_A0628 (rpoA)
Transcription machinery [BR:
lie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LIF_A0628 (rpoA)
DNA repair and recombination proteins [BR:
lie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LIF_A0628 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
CdvA
Motif
Other DBs
NCBI-ProteinID:
AER01436
LinkDB
All DBs
Position
1:774474..775451
Genome browser
AA seq
325 aa
AA seq
DB search
MSLKSLLKGFKRPKKIEFNTEANTPNYGKFVAEPFERGFATTIGNSLRRTLMSSIEGAAI
SAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEEKDQSKIIHLELKGAGYFRAG
DLAVDSSIEIMNPDLHIATLNEDANLVMDLEIQRGRGYVPAEEKKKDIEVLGTIPVDSIF
SPVQKVVFEVSETRVAQRSDYEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFINFEEE
LEEEDDELDEADEKLKASLSKRVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKH
YSDQCLQELKVKLSTLGLSFGMRDF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
ttgtctctcaaaagcttactcaaaggatttaaacgtcctaagaagattgaattcaacacg
gaagcgaacactcccaattatgggaagttcgttgcagagccatttgaaaggggttttgcg
acaactatcggtaactctctcagaaggactttgatgtcctcgattgagggagctgcgatt
tctgccattcggatcgaaggtgtaaaccatgagttttcctttatcgaaggagttgcagag
gacgtaacgagaatcattctgaacttaaaacaagttcgcattaaatacgagccagaagaa
aaagatcagagcaaaatcattcatctcgaattgaaaggtgctggttattttagagcgggt
gatcttgccgtggattcttccattgagatcatgaatccggatcttcatatcgctactctc
aatgaagatgcaaatctggttatggatttggaaattcaaagaggaagagggtatgttcct
gcggaagaaaagaaaaaagacatagaagttcttggaaccattcctgtggactctattttt
tctccggttcagaaagtagtttttgaagtttccgaaacccgtgtagcacaaagatctgat
tatgaaaaactgactttagaagtttggacggatggttctgtttctccggacgacgcggta
gctcaggctgcgaaaatcttaaaagaacatcttacggtatttatcaatttcgaagaagaa
ttggaagaagaagatgacgaattggatgaagccgatgaaaaacttaaagcttctttatcg
aaacgcgtggaagaattggagctttccgttcgttctctcaacgttctgagaagtttggaa
atcgattttattggtgatcttgtaaagagatccgaagaagaaatgtctaagtccaaacac
tatagcgatcagtgtctccaagagttgaaagtaaaactttctactttaggtctctctttc
ggaatgagggatttttaa
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