Leptospira interrogans serovar Lai IPAV: LIF_A0786
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Entry
LIF_A0786 CDS
T01983
Name
(GenBank) exodeoxyribonuclease v alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lie
Leptospira interrogans serovar Lai IPAV
Pathway
lie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LIF_A0786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lie03400
]
LIF_A0786
Enzymes [BR:
lie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LIF_A0786
DNA repair and recombination proteins [BR:
lie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LIF_A0786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
Helicase_RecD
UvrD-helicase
SH3_13
UvrD_C
AAA_12
DEAD
SLFN-g3_helicase
ResIII
ARM_LIN
T2SSE
NPHP3_N
nSTAND3
AAA_28
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AER01593
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Position
1:972522..974360
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AA seq
612 aa
AA seq
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MIFIEKLRTDILELIQSSEFEKKKLIKVSEEDSNYILEILNSIWEATQEGSLCVPVKQEW
KKILKIKLPGLVVDRFENTEWVYFEKTYHSKIELERLLKERIENNVSVNVDTDRVEKILK
DLESKSFSLKKNQKKTIFSCLNSSFQIISGGPGTGKTTVVAFLLQILNELKQLPSPEKIA
LVAPTGRAAQRLTESVQENLKKISTSLENGFLRGQTIHGLLNYKQSLGGFYYNRERYLPH
RLIIVDEVSMVDLDLMLSLWNSIPKNETIQEGTIPFRFILIGDPHQLPSVEKGAVLSDFL
SVLESKRFHFVSKLEESNRQQPNTNGEVSKIVTLAEEILKYSPENLNLGTKIDESFPKTN
QIKENILYKSEVVWLQNIESSTSDYFSRDELVEKLWKEIFYPQIDRISSWKIQDSFCFDK
PDFIQKFQEELKRFRCLTIFRSGYWGVDAIQTKIMNLAAQNLFFGKGGNFFAKRLSKGIY
FVGLPILITRNDKSRKLFNGDIGIVLKTESTGELRAVFPIEGKLFQFALDTLPEHEPAFV
MSVHKSQGSEYDTILIYLPDSIEEEKSNGLLNRQVLYTAITRAKKQVILAGNPQTWEIGI
ANFQNRNTGFRI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgatttttattgaaaaactaaggacggatattttagaactgattcagtcatcggaattc
gaaaagaaaaaattaataaaagtatcagaagaggactctaattatatattagaaatattg
aattcaatttgggaggctactcaggaaggaagtttatgtgttcctgtaaaacaagaatgg
aagaaaattttaaaaataaaactccccggtcttgtcgtagatcggtttgaaaatacggaa
tgggtgtattttgaaaaaacgtatcattctaaaattgaattggaacgtcttttaaaagaa
agaatcgaaaataatgtttcggttaatgtggatacggatcgagttgaaaaaattctaaag
gatctggaatcgaaaagtttttcactgaaaaaaaatcaaaaaaaaacaatcttttcttgt
ttaaactcctctttccaaattataagtggaggacctggtactggaaaaacaaccgtagta
gcgtttttattacaaattttgaatgaactaaagcaacttccttctccagaaaaaattgca
cttgttgcaccgactggaagggcggctcagaggttaacggaatcggttcaagaaaattta
aaaaaaatctccacgtctctcgaaaatggatttctaagaggacaaacgattcacggactt
ttaaactacaaacagtcgttaggtgggttttattataatcgagaaagataccttccacat
agactaattatcgtggacgaagtttctatggtagatttggatctgatgctttctctttgg
aattcaattcctaaaaatgagacgattcaagaaggaaccattccgtttcggtttatattg
attggagatccgcatcaacttccttctgtagaaaaaggtgccgtgttaagcgatttttta
tccgtgttagaatctaaacgatttcattttgtttctaaattagaagaaagtaatcgtcag
caaccaaatacaaacggagaagtttcaaagatagtcacactcgcagaagaaattttaaaa
tattctcctgaaaatctaaacttaggaactaagatagatgaaagttttccaaaaacgaat
caaattaaagagaatattttatacaaaagtgaagttgtatggttgcaaaatattgaaagt
agcacttccgattatttttctagagatgagttagttgaaaaactttggaaagaaattttt
tatcctcaaattgatagaatctcttcttggaaaattcaggattctttttgttttgataaa
ccagattttattcaaaaatttcaagaggaactaaaacgatttcgttgtcttacgattttt
aggagtggctattggggagtggatgcgattcaaacaaagatcatgaatttggctgctcaa
aatcttttttttggaaagggcgggaacttttttgccaaacgactttccaagggaatttat
tttgtaggtcttcccattttaattactcgaaacgataaaagtagaaaactttttaacgga
gatattggaatcgtattaaaaacggaatctaccggagaacttagggcggtgtttccgatt
gaaggaaaactttttcagtttgcgttagacactcttccagaacatgaacctgcgtttgta
atgagtgtacataaaagtcaaggatcagaatatgatacaatcctaatttatcttccagat
tctatagaagaggaaaaatctaatgggttactcaatcgtcaagttctttatacagcaatt
acaagagctaaaaaacaagtgatcttggctggaaatccgcaaacctgggaaattggaatc
gccaattttcaaaatagaaatactgggtttagaatttaa
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