Leptospira interrogans serovar Lai IPAV: LIF_A1392
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Entry
LIF_A1392 CDS
T01983
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lie
Leptospira interrogans serovar Lai IPAV
Brite
KEGG Orthology (KO) [BR:
lie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lie03032
]
LIF_A1392 (topA)
03400 DNA repair and recombination proteins [BR:
lie03400
]
LIF_A1392 (topA)
Enzymes [BR:
lie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LIF_A1392 (topA)
DNA replication proteins [BR:
lie03032
]
Prokaryotic type
DNA Topoisomerases
LIF_A1392 (topA)
DNA repair and recombination proteins [BR:
lie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LIF_A1392 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
DUF1402
Zn_ribbon_11
Motif
Other DBs
NCBI-ProteinID:
AER02192
LinkDB
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Position
1:1709778..1711619
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AA seq
613 aa
AA seq
DB search
MSLLIIVESPSKAKTIAGYLGKEFRILATLGHVADLPKTTLGLDLKNRFEPEYVILPGKK
KILSEIIKTAKQSQKVFLATDPDREGEFISAYIRDRLQKKSNVFRIRFTEVTKQAILNSL
QNPDTINEFLVDAQKTRRIGDRLIGYFISPVLWKQIGPGLSAGRVQSVALKWICEREEEI
RNFKIEIYYNILLHGTDQKGIVGIFSRTGDRIFSKEKADQILQNVQKEKEFRISEKKETL
GKLFPPPPFQTASLQQEAFKKLRFSSKKTMSLSQRLYEGMDLGNGQRNGLITYMRTDSVR
LSSEFVERARSWILSELGETFASPLERKIRKSAKKIQDAHEAIRVTDPFLTPKEIKKFLG
KEEAALYDLIWKRTISSLLPAEEFIKIEYSIFAAGECFQLETKKTIFPGYKILNEADVKT
NPSWEKGELFILQKVECEKKQTEPPSRYSEGTLVAKLEKQGIGRPSTYATVSETLLKRKY
VYEEKKFFYPFSLGEKVNFFLQSSFGELFREKFTAELESDLDRIEKKEIDSNSILNRLWL
DLQTQIQNSKFILFQKEWATVLQKKKETGWGICPVCRNGILQKKKSSRKKEFYQCNRFPD
CEFVSYELPESLE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
gtgtctttacttatcattgtagaatccccatccaaggcaaaaactattgctgggtattta
gggaaggaatttagaattttagcaaccttaggtcacgtagccgatctacctaaaactact
cttggattagatttaaaaaatcgttttgaaccggaatacgtaattcttcccggaaaaaaa
aagatactttctgaaatcataaaaacggcaaaacaatctcaaaaagtttttctggcaacg
gacccagatcgggaaggtgaatttataagcgcctacataagagatcgtttacaaaaaaaa
tcaaacgtctttcggattcgttttacagaggttaccaaacaagcgattctaaattcgtta
caaaatccagatacgattaatgaatttttggtagatgcacaaaaaactagaagaatcgga
gatagattgatcggttattttatcagtccagtgctttggaaacagatcggtcccggatta
tccgccggaagggtacaatctgtcgcgttaaaatggatctgtgaaagagaagaagaaatt
agaaattttaaaatagaaatatattataatatactattgcatggaaccgatcaaaaagga
atagtgggaatttttagtagaaccggcgatcggattttttccaaagaaaaagctgatcaa
atcctacaaaatgttcaaaaagaaaaggaatttcgtatctccgaaaaaaaagaaactcta
ggaaaactttttcctccgcctccgtttcaaactgctagtttacaacaagaagcttttaag
aaattacgattttcttctaaaaaaacaatgagcctctctcagaggctttatgaaggaatg
gatctaggaaatggccaaagaaatggattgatcacttatatgagaacggattcagtacgt
ttaagttctgagtttgttgaacgtgcaaggtcttggattttatccgaattgggtgaaact
tttgccagtccacttgaacgtaaaattagaaaatcagctaaaaaaatacaagatgctcat
gaagcaattcgtgttacggatccttttttaactccaaaagaaataaaaaagtttttagga
aaagaagaggcggctctttacgatttgatttggaaacgaactatttcgtccttacttcct
gcagaagaatttataaaaatagaatattccatttttgctgccggggaatgttttcaatta
gaaactaaaaaaactatttttccaggttacaaaatattaaacgaagcggatgtaaaaact
aatccgagttgggaaaagggagaattatttatccttcagaaagtggagtgtgaaaaaaaa
caaacggaaccgccgtctagatattcagaaggtactttagtcgcaaaattagaaaaacaa
ggaattggtcgaccttccacttatgctacggtttcagaaacacttttgaaacgaaaatat
gtttatgaagaaaagaaatttttttatcccttctcattgggagagaaggtcaatttcttt
ttacaatctagttttggagaactctttcgagaaaagtttaccgccgaattagaatcagat
ttggatcgaattgaaaaaaaagagatagattctaattctatattaaaccgactttggttg
gacctacaaactcaaattcaaaatagtaaattcattttgtttcaaaaagaatgggctacg
gttttgcaaaagaaaaaagagactggttggggaatctgtcctgtttgtagaaatggcatc
cttcaaaagaaaaaaagctctcgaaagaaagaattttatcaatgcaatcgtttcccagac
tgtgaatttgtaagttacgaactgcctgaatctttggaataa
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