Leptospira interrogans serovar Lai IPAV: LIF_A3460
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Entry
LIF_A3460 CDS
T01983
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lie
Leptospira interrogans serovar Lai IPAV
Pathway
lie03030
DNA replication
lie03430
Mismatch repair
lie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LIF_A3460 (dnaX)
03430 Mismatch repair
LIF_A3460 (dnaX)
03440 Homologous recombination
LIF_A3460 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lie03032
]
LIF_A3460 (dnaX)
03400 DNA repair and recombination proteins [BR:
lie03400
]
LIF_A3460 (dnaX)
Enzymes [BR:
lie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LIF_A3460 (dnaX)
DNA replication proteins [BR:
lie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LIF_A3460 (dnaX)
DNA repair and recombination proteins [BR:
lie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LIF_A3460 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
AAA_5
RuvB_N
TIP49
AAA_14
AAA_16
AAA_30
Rad17
AAA_7
AAA_18
ResIII
DNA_pol3_gamma3
nSTAND3
AAA_19
Mg_chelatase
RNA_helicase
ABC_tran
AAA_2
AAA_28
DEAD
SKI
TsaE
DEXQc_Suv3
RsgA_GTPase
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AER04223
LinkDB
All DBs
Position
1:4321586..4323025
Genome browser
AA seq
479 aa
AA seq
DB search
MAGTHEVLSRKYRPQKFRDVIHQDLAIGALQNALKSGKIGHAYIFFGPRGVGKTTIARIL
AKRLNCQNPIDNEPCNECNSCSEITRGISSDVLEIDAASNRGIENIRELRDNVKFAPMGG
KYKVYIIDEVHMLTDQSFNALLKTLEEPPAHIVFVLATTEFHKIPETILSRCQDFIFKKV
PLSVLQDYSEKLCKIENVQYDQEGLFWVAKKGDGSVRDMLSFMEQAIVFTDSKLLGAAIR
KMIGYHGIEFLTSFIKSLVDPDNHSKSLEIIESLYQEGQDIYKFLWDSIEFTHTLNLIRD
SLADPESVNFPKEDLVKMKSDFENVDSSKLNFLSGKLFEIYERIKTIRLRNSFEIKVFTE
IQIKKLVEELTYPSLAGLIDKINHLILMVQGSKNVLSDVNQNTAFALKDTLQPETSKKKD
KLSSDVILESQFESNQQDSNLENTKPAELSSRKFDTSTEIKKKFLGTEVDPNQTPKLDS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaactcacgaagtcctttcccgaaaatatcgtcctcaaaaatttcgggacgta
attcatcaagaccttgctataggtgctcttcaaaacgctcttaaatctggaaagattggt
catgcgtatatattcttcggccctcgtggagttggtaaaaccacaatcgcaagaattctc
gcaaaacgtttaaactgtcaaaatcctatcgacaacgagccatgtaacgaatgcaattct
tgcagcgaaattactcgaggaatttccagcgacgttttagaaatagacgcagcaagtaac
cgaggaattgaaaacatccgcgaacttagagacaatgtgaagttcgctccgatgggcggg
aaatataaggtttatatcatagatgaagtccacatgcttacagaccaatcatttaacgca
cttttaaaaacattagaagaacctcctgctcatattgttttcgttttagctactacagag
tttcataaaattccagagacaattctttctagatgtcaggactttatttttaaaaaagtc
cctttgtccgttttacaagattattccgaaaaactttgtaaaatcgaaaatgttcaatac
gatcaggaaggtcttttctgggtcgccaaaaaaggagacggttccgtaagagacatgctt
tcatttatggaacaggccatcgtatttaccgactcaaaactgttaggcgctgcaattcgt
aaaatgataggttatcatggaatcgaatttttgacttcgtttatcaaaagtttagtcgat
ccagacaatcattctaaatccctggaaatcatcgaatctctttatcaagaaggccaggac
atctataaatttttatgggattccatagaatttactcacactctcaatttaattcgagat
tctcttgcagatcccgaatccgttaattttccaaaagaagatctcgtaaaaatgaaatcg
gatttcgagaatgtagattcttccaaattgaattttctttccggaaaactttttgagatc
tatgaaagaattaaaacgattcgtttgagaaactcttttgaaattaaagtttttactgaa
attcaaatcaaaaaactcgtagaagaacttacttatccaagtttggcgggtttaatcgat
aaaatcaaccacctgattcttatggttcaaggttctaaaaatgttttatcagatgtgaat
caaaataccgcttttgcacttaaagatacgttgcaaccggaaacttctaaaaaaaaagat
aaactttcttcagacgttattttagaatctcagtttgagtctaatcaacaggattctaat
ttagaaaacacaaaacctgccgaactaagttctcggaagtttgacacaagcactgagatt
aaaaaaaagtttttaggtacagaagtagacccaaaccaaactcctaaattggattcttaa
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