Leishmania infantum: LINJ_09_0770
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Entry
LINJ_09_0770 CDS
T01112
Name
(RefSeq) putative cleavage and polyadenylation specificity factor 30 kDa subunit
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
lif
Leishmania infantum
Pathway
lif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LINJ_09_0770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lif03021
]
LINJ_09_0770
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_09_0770
Transcription machinery [BR:
lif03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
LINJ_09_0770
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
LINJ_09_0770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCHC
zf-CCCH_3
zf-CCCH_12
zf-CCHC_2
zf-CCCH_9
zf-CCCH_RBM22
Motif
Other DBs
NCBI-GeneID:
5066947
NCBI-ProteinID:
XP_001463534
UniProt:
A4HTZ3
LinkDB
All DBs
Position
9:complement(274193..275203)
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AA seq
336 aa
AA seq
DB search
MFVDDAAGTHFDFEDTLPKEQPRTEKKLEICQDFQRGRCRLGDACPQRHIISAYRTVQTK
VCKHWLRGACVNGDNCLYLHEYDNRYVPQCAFFERVGECTNPECPFLHTKPNESQPECAA
YRRGFCPLGPKCRLRHVKRESACPYYLAGFCPLGPRCPLGHPIQERYDRDAVSKRILAKM
IVERADDPTFNRSATCYRAGCFDPGHLAPDCPGPQHSVLHKALGEIQEPGQPTGGLESGG
HGGGGGGSHRRCFLCDQEGHTVKDCPMNTHRNQHRAGGGGGPGAPHGSGGGAGMGSRRRL
RREGGAGGGGGGSAGAGAGGGFGGGGGRRRPGRDHY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcgacgatgccgccggcacgcacttcgacttcgaagacacgctgcccaaggag
cagccccgcacggagaagaagctcgaaatctgtcaggacttccagcgcggccgctgccgt
ctcggcgacgcctgcccgcagcgccacatcatctccgcctaccgcaccgtccagacaaag
gtgtgcaagcactggctgcgtggcgcctgcgtgaatggggacaactgcctttaccttcac
gagtacgacaaccgttatgtcccgcagtgcgccttctttgagcgtgtgggggagtgcacc
aaccctgagtgccctttcctgcacacgaagccgaacgagtcacagccggagtgcgccgcg
taccgccgcggcttctgcccgctggggcccaagtgccgcctccgacatgtgaagcgggag
tcggcgtgcccatactaccttgccggcttctgcccgctaggcccacgctgtccgctaggg
caccccatccaagagcgctacgaccgcgatgccgtgtctaagcgcatcctggccaagatg
attgtggagcgcgccgatgacccaaccttcaaccgcagcgcaacatgctaccgggccggc
tgctttgaccccggccatctcgccccggactgtccaggtccgcagcacagcgttttgcac
aaagccctaggcgaaattcaagagccggggcaacccactggcggcttggagagcggcggg
cacggcggtggtggcggcggctcccatcgccgctgcttcttgtgtgatcaggagggccac
acggtaaaagactgtccaatgaatacgcaccgtaatcagcaccgcgccgggggcggtggc
gggcctggcgccccacacggcagtggcggcggagctggaatgggtagccgacggcgattg
cggcgagagggcggtgccggcggtggcggcggcggtagtgctggtgctggtgctggtggt
ggtttcggtggcggaggcggtcggcgacgccccggtcgcgatcactattag
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