Leishmania infantum: LINJ_14_0900
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Entry
LINJ_14_0900 CDS
T01112
Name
(RefSeq) putative DNA excision repair protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
lif
Leishmania infantum
Pathway
lif03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LINJ_14_0900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lif03036
]
LINJ_14_0900
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_14_0900
Chromosome and associated proteins [BR:
lif03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
LINJ_14_0900
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
LINJ_14_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
HDA2-3
Motif
Other DBs
NCBI-GeneID:
5067594
NCBI-ProteinID:
XP_001464269
UniProt:
A4HW28
LinkDB
All DBs
Position
14:complement(348369..352154)
Genome browser
AA seq
1261 aa
AA seq
DB search
MADDLASLQQQFGAFQDEEEMRMDVAARVVAQSSREALEDEERLKKSWRELEKAEHAVGE
LQLELSEAQLAVAQESSGLLGDAQRNKSSGPATPSPRRVSDIRFQLNAAERELKRADAAV
RKLQKEVDQRQAARLAEAKRHEREEAEAERAAAAARAAAHPKAADVTTVARAKSATGRPV
PLASSSSTILPRANTSVNGGALAGGSLSASPPTVMTTTRVLYRAPTHLKGITQSDYSGGE
VLPSLSRVQVTRADIRSKQRRYQDDSEMEHYVERVTKRQRLEAVANEQRRLIALGNDGDT
PSQSLSASIEKLAEARVKREGEQDGHAHQVKQESGGDDAAGAATPPVAAVAKARVAKKEA
EGGERARRLPRAGVKVETGEEEGAHDVIDVDALMEADDDAAVAAAVSRVSTQLTGGYTQR
SGKATPSISLSSQQQQQQRGRAGSASSATVSESEEVVWEMEEVTLLPGVRMDAAIYNRLL
DYQQEGLLWLLTLHSRRTGGILGDEMGLGKTIQVAVMINALHHSGMLRGPVLIVAPMTVL
RQWLAELHRWAPYVRSCVMHESSGSDTTRDSLLQSVQGTPAVVITTYAAMRVHCGLLHRT
GFQYVILDEGHKISNPEAGATLAAKSFTTPHRLILSGSPIQNSLKELWCLFDFVRPGLLG
TMSRFIDEFETPIALSRNARASPLSLATAVECAKALQTHIAPYLLRRLKRQVNTSLPPKY
ERVLRVPLTDKQLDQYLQVLSSPVVQGLFAQTAMYGSRNGGLDRDGRDSTGSLHVAGPRA
KMASRRHNSGVRLESFRVMNQLRQICNHADIYAVQQGADEEDRMMLGRRGAAAKLSAISA
ARPGQHRSFRSNNPVDLLGSGKLNALLMMLKEWQSFGHRVLVFSQTRMMLDIIENMCEQQ
AYRYIRMDGATNSHYRQELMDRFNEDVSIFVALLTTRVGGIGVNLIGADRVVIFDPDWNP
ITDVQARERAWRIGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVLKDPELQRFFDV
QDGFMESLLLGSEYANRVPVDKRYLLAAHHLHSVSAGDRDRAPGRDRHAALGGEYGNAVP
GVDDDDNTDSDVSEGNIGVAGSKGEQPRKERDFGMLVPLKDEGGIDDVGADPDDTGGADE
DGSPVGIPGMGDRNKKTSKGKEVWRETQMLQKLVDCQDVSVAGHDRVAHRLARKKAEDMI
RRVSSSALTAEAMREQQRQYSLLQAIGEKKAKEAADREEKARYYREEIAAAAAAARKRRH
E
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatttggcgtcactgcagcaacagttcggcgcctttcaagatgaggaagag
atgcgcatggacgtggcggcgcgcgtcgtcgctcagtcctcgcgagaagcgctcgaggac
gaggagcggctcaagaagagctggcgcgagctggaaaaggcggagcacgctgtgggggag
ctgcaactagagttgagcgaggcgcagctggcggttgcacaggaatcgtccgggttgctg
ggtgatgcgcagcgcaacaagtcatccggtccggcgacgccgtcaccgcggcgggtttcc
gacatccgcttccagctcaacgcagcggagcgcgagctcaagcgcgctgacgcggcggtg
cggaaacttcaaaaagaggtcgaccaacgccaagctgcgcggcttgccgaagcgaaacgg
cacgagcgggaggaagcagaggcagagcgcgcggcagccgcggcccgagccgcagcgcat
ccgaaggcagccgacgtcacaacagtcgcgcgggcaaaaagcgccaccggccgacctgtg
cctctcgcgtcatcgtcctcaactatactcccacgcgcaaacacgagcgtgaacgggggt
gcgctggcgggtggaagcctttcagcgtcaccgccaactgtcatgaccacgacgcgcgtg
ctgtatcgagcgccgactcacctgaagggtatcacgcagagcgactacagcggtggtgaa
gtgctgccctcgctgagccgggtgcaagtgacgcgcgcggacatccgctcgaagcagcgc
cgctaccaggacgactcagagatggagcactacgttgagcgcgtcaccaaacgacagcga
ctggaggcggtggcaaatgagcagcgtcggctgattgccctgggcaacgacggtgacacg
ccttcgcagtcgttgtcggcctcgatcgaaaagctggccgaggcgcgagtcaagagggaa
ggtgagcaagacggccatgcgcatcaggtgaagcaagagtctggtggtgatgacgctgcc
ggcgcagccacgccaccagtcgcagctgtagccaaggctcgagtcgcgaagaaagaggcg
gagggcggcgagcgtgcccgtcgcctcccgagggcaggggtgaaggtggagacaggggaa
gaggaaggggcacacgacgtgattgacgtggacgcactcatggaggccgacgacgacgcg
gcagtggcggcggcggtgagccgggtctccacccagctcactggcggctacactcaacgt
agcgggaaggccacgccgtctatatcgctgagctcgcagcagcaacagcagcagcggggg
cgcgccggctcagcatcgtcagcgaccgtctcggagagcgaggaagttgtatgggagatg
gaggaggtgacgctgctgcccggtgtgcgcatggatgccgccatctacaaccgcctactc
gattaccagcaagagggactactgtggctcctcaccctgcactcccgccgcacgggcggt
atcctcggcgatgagatgggcctcggcaagacgatccaggtggcagtgatgatcaatgcc
ctgcaccactccggcatgctgcgcgggccggtgctgattgtggcaccgatgacggtgctt
cgtcagtggttggcggagctgcaccgctgggccccctacgtgcgctcctgcgtcatgcat
gagagcagcggcagcgacacgacgcgtgactcgctgctgcagtcagttcaaggcacgcca
gccgtggtcatcacaacgtacgcggcgatgcgagtgcactgcggtttgctgcatcgcacg
ggcttccagtacgtcatcctcgacgaggggcacaagattagcaacccagaggctggcgcg
acgctcgcagcgaagtctttcacgacgccgcaccgactgatcttgagtggcagccccatc
caaaactcgctgaaggagctgtggtgtttgtttgattttgtacgccctggccttctcggc
acgatgagtcgcttcatcgacgaattcgagacgccgatcgcgctgagccgcaacgcgcgt
gcgagcccgctgtcgctggcaacagccgttgagtgtgcaaaagcactgcagacccacatc
gccccgtacctgcttcgccggctgaagcgccaggtgaacacgtctttgccgccaaagtac
gagcgcgtgctgcgagtgccgcttacggacaagcagctcgaccagtatctgcaggtgctg
tcctcgccagtggtgcagggactctttgcgcagacagcaatgtacggctcgcgcaacggt
ggcctcgaccgcgacgggcgtgatagcactggctccctgcacgtggcggggccgcgggca
aagatggcgtctcgccgccacaacagcggcgtgcggctggagtcgttccgtgtcatgaat
cagctgcggcaaatctgcaaccacgccgacatctacgccgtgcagcaaggcgcggacgag
gaggaccgcatgatgcttggccgtcgtggcgcggcggcgaagctgtctgctatttcggca
gcacgacctggtcagcaccgctccttccgcagcaacaaccccgtcgacctcctcggcagc
gggaagctgaacgcgctgctcatgatgctgaaggagtggcagtcgttcggccaccgcgtc
ctcgtcttctcgcagactcgcatgatgctcgatattatcgagaacatgtgcgagcagcaa
gcctaccgctacatccgcatggatggtgcgacgaacagccactatcggcaggagctgatg
gaccgcttcaatgaagacgtctccatctttgtcgccttgctgacgacgcgcgtcggcggc
atcggcgtcaacctcatcggcgccgaccgcgtcgtcattttcgacccggactggaacccg
atcacggacgttcaggcgcgtgagagggcctggcgtatcggccagaagagagaagtgtgc
gtctaccgccttatcacgagtggcagcgtcgaggagtcgatcctgcggcggcagctggcg
aagatgtacgtgacggacaaggtgctgaaggatccggagctgcaacgcttctttgacgtg
caagacggcttcatggagagccttctgctcggttccgagtacgcaaaccgcgtgccggtg
gacaagcggtacttactggcggcgcaccacctgcatagcgtctcggccggcgaccgcgac
cgcgcgcctggtcgggacagacacgcggcgctggggggggagtatggcaatgcggttcct
ggcgttgacgatgatgataacaccgacagcgacgtgagtgaaggaaacattggcgtcgcg
ggaagcaagggggagcagccgagaaaggagcgcgactttggcatgctggttcctcttaag
gacgagggcggcatcgacgatgtcggtgctgaccccgacgatacgggaggcgcggacgag
gacggcagtccagttggcatccctggcatgggcgacagaaataagaagacgagcaagggc
aaggaggtgtggcgtgagacacagatgctgcagaagctggtggattgccaggacgtctct
gtggcagggcacgaccgcgttgcgcaccgcctggcacgcaagaaggcagaagacatgata
cgccgcgtgtcctcatcggcgctcacggcggaggcgatgcgagagcagcagcgccagtat
agcctgttgcaagctattggggagaagaaggcgaaggaggcggcagaccgagaggagaag
gcgcgctactatcgtgaagagatagcagcagcagcagcagcggcgcggaagcgtcggcat
gagtag
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integrated database retrieval system
