Leishmania infantum: LINJ_17_0730
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Entry
LINJ_17_0730 CDS
T01112
Name
(RefSeq) conserved hypothetical protein
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lif
Leishmania infantum
Pathway
lif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LINJ_17_0730
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lif01009
]
LINJ_17_0730
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_17_0730
03036 Chromosome and associated proteins [BR:
lif03036
]
LINJ_17_0730
Protein phosphatases and associated proteins [BR:
lif01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
LINJ_17_0730
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
LINJ_17_0730
Chromosome and associated proteins [BR:
lif03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
LINJ_17_0730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
5068136
NCBI-ProteinID:
XP_001464732
UniProt:
A4HXE1
LinkDB
All DBs
Position
17:complement(307909..311157)
Genome browser
AA seq
1082 aa
AA seq
DB search
MLRDYNGDHFFQMDDVEGAPALMDEKDCPVKEFDRQTRYRYPVLWRAASSPSAPSIANES
SSSRHQHQQLSPRLHLHSSPPVSSSAEEIARTASPELGTHRDGKDNGEEAKGPRHYSRHA
GVSTSLAVESPPQDSAASSPATLSARFAGFTAAQQQRFESLQERGPPGHEIARWKMLELM
RHWMSMPSTRAGLDAVIRDVLVDAGIAKAKEAWGGSDACTAASRDSASSLQLQQRGGTIQ
PVATCANPPSTKAPPKKVSPKNKLITTSVALESDGEPPSSTAHGEEDKRKLECSKEGPRP
LADEAPAPSVDQATPASTPTPHAVAIAFSSPALAVRGTTLPPDEATPSANGARVRSTSAR
RRRRKSRKGAVSAQERRVPPADGSRSPTPQDVKGDTDESAALPVASLTPEKHVAPLTPRS
GVSLGTAASRERTDAASDARASPHRYTESPSLHHSSSEEALPNSSHNSPSPRQRSRSNNL
RAAPSRREATYEEIPRFYFPLGRPTTREMMISGPLSSKHENPHLKIADGVSMSAPMYDGG
ESSRVGANAGALVGTSKDSVLFPESRRAQKVAPMSQLHALDDRQVAHYIQREFGRLPPLP
RHSQRVWLLGGRLRSGSHNHTNLPFAKQELLYRQQFIQCVQRLCSQCFGVPRYFAFVILR
LIQWEMHNGNADAAEHRSPPQTRHGNGRLGSSSSLMSHTANGGGSGATGLPSVFLITAQH
MKNFYEAYLKNKDMVRRIFDLLILSSRLPTSPAAAASLAAMSAATETNDQAAATPGPSFS
ASPLRSFLLPKDFVAYINVLLTYHPGLAFLRQTPDFQTKYLDTVIYRIFYELDRFDRGCI
SYSELAASRLIDAFRQVDSAEDINMVLLFFSYEHFYVLYCRFWELDEDRDMLLAPEDLMR
YAPEDVMNPCIVQRVFAGVGRRRRCNVPHRIGYEDFVWFCLSEEDKSTPQAIRYWFRVLD
LDGDGVLSVYELRQFYNATCDKIAQYVQEGLVTFEDVVCQVFDMMRCSEYRGLFLSDLMR
EPEAAAVALNLLTNVVKFLQFEQRDPFVAHEERLLGGPEQSTWDRFARLEYDRMALEADG
ED
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgactacaatggcgaccacttttttcaaatggacgacgtcgaaggcgctcca
gccttgatggatgaaaaggactgccctgtcaaggagtttgatcgacagactcgatatcgc
tatcccgtactttggcgggcagctagcagtccttccgctccatccatcgccaatgaaagc
agctcatcgcgtcaccagcaccagcagctttcgccgcgcttgcatcttcactcctcgccg
ccggtgtcgtcttccgctgaggaaatcgcgcgcactgcttcgccggagctgggcacccac
cgagatgggaaagacaatggcgaagaggcaaaggggccccgacactactctcgccatgcc
ggagtctcgacctctctagctgtcgagtcaccacctcaagactccgcggcgtcctcgcca
gcaacgttgtcggcccggttcgcggggtttacagcggcgcagcagcagcgttttgagagt
cttcaagaacgcggaccaccaggacacgaaatcgcgcggtggaaaatgttggagctgatg
cggcactggatgagcatgccaagcactcgggccggcctcgacgcagtcattcgagacgtg
ctcgtggacgctggaattgcaaaggcgaaggaggcatggggtggcagcgatgcctgcact
gcagcgtcacgcgacagtgcgtcctctctgcagctacagcaacgtggtggcaccatccag
cccgtcgccacatgcgccaacccaccttcgacgaaggcgccgccgaaaaaggtgtccccc
aagaacaaactgattaccacgagcgtagcactcgagtcggacggtgagcctccctcatcc
actgctcacggcgaggaggacaagagaaagctggagtgcagcaaggaaggtccgcggcct
ttggctgacgaagccccagctccatccgtcgatcaggccactcctgcttccactccgact
ccgcacgccgttgcgattgcattttcctctcctgcactcgctgtgcgagggacaacgttg
ccgccagatgaggcgaccccttcggcgaatggtgctagggtgcgctcgactagtgcccgt
cggcgccgacgtaaaagtagaaagggtgccgtttctgcacaagagaggcgggtgccgcct
gcggatggatcgcgttcgccaaccccgcaggatgtcaaaggggacactgacgaatccgct
gcgttgcccgtggcgtcactgacaccagagaagcatgtagcacccctgacgccgagaagt
ggtgtctcgcttggtacggcggcatcgcgcgagcgtacagatgccgcgagcgacgcaaga
gcctcgccgcaccgatacacggaatcgccgtccttgcatcattcgtcatcggaggaggct
cttcccaactcctcccacaactccccctctccgcgccagcggagccgcagcaacaaccta
agagcagcgccgtcgcggcgggaggccacatacgaggagatacctcgcttctacttcccc
ctcgggcgcccgactacgcgagagatgatgatcagcggacctctctccagcaagcacgag
aaccctcatttaaagattgccgacggcgtctccatgtcggcccctatgtacgacggaggg
gagagcagccgcgtgggcgcgaacgcgggggcgctcgttggaaccagcaaagacagcgta
ctctttcccgaatcgcgacgggcgcagaaggtggcgccgatgtcacagttgcacgcgctc
gatgaccggcaggtggcgcattacattcagcgcgagtttggccgtcttccgccccttcct
agacattctcagcgggtttggctgctgggtggacgtctgcgcagcggtagccacaaccac
accaatttacccttcgctaagcaggagctcctgtacaggcagcagtttattcagtgcgtg
caacgcctgtgctcccagtgctttggcgtcccgcgatatttcgcctttgtcatattgcgc
cttatacagtgggagatgcacaatgggaatgctgacgcggcagagcatcgtagtccacct
cagacccgccacggcaacggtcgcctggggtcctcatcgtcgctaatgagtcacacagcc
aacggcggcggcagtggtgcgactggactgccatccgtttttctcatcaccgcgcagcac
atgaagaatttctacgaggcctacctgaagaacaaggacatggtgaggcgcattttcgac
ctgctgattctctcttcccgcctgccgacctcgccagcagcagcggcgtcgctggcggct
atgagcgcagcaacagagacaaacgaccaggctgcggcgaccccgggaccctcctttagc
gcgtcacccctgcggtcctttttgctacccaaggactttgtcgcctacattaatgttctc
ctcacttatcacccggggcttgcgtttctgcggcagacacctgacttccagaccaagtac
ctcgacaccgtcatctaccgcatcttctacgagctcgaccgctttgaccggggctgcatt
agttattcggagctggctgcgtcgcggctgatcgacgcctttcgtcaggtcgattctgct
gaggacatcaacatggtacttctcttcttctcctacgagcacttttacgtgctgtactgc
cgcttctgggagctagacgaggaccgcgacatgctactggcaccagaggacctcatgcgg
tacgccccggaggatgttatgaacccgtgcattgtgcagcgcgtctttgctggggtcggg
cggcggcgccgctgcaatgtgccgcatcgcatcggctacgaagattttgtttggttctgc
ctctcggaggaggataagtccacaccgcaagctatccgctactggtttcgcgttcttgac
ctggacggggatggggtgctttctgtctatgagctacgccagttttacaacgccacgtgt
gacaagattgcccagtacgtgcaggaagggctggtcactttcgaggacgtcgtgtgccag
gtgttcgacatgatgcggtgctctgagtatcgcgggctctttctttcagacctcatgcgg
gagcctgaggcggctgcggtggcgctgaacctgctgacgaacgtggtgaagttcttgcag
tttgagcaacgcgatccgtttgtagcgcacgaggagcgcttgctcggtggcccagagcag
tcaacatgggaccgctttgcccgtctagagtacgaccgcatggcgttggaggcagatgga
gaggattga
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