Leishmania infantum: LINJ_20_0020
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Entry
LINJ_20_0020 CDS
T01112
Name
(RefSeq) conserved hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
lif
Leishmania infantum
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lif03009
]
LINJ_20_0020
Ribosome biogenesis [BR:
lif03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
LINJ_20_0020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_NWD2_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_2nd
WDR54
Beta-prop_IFT122_2nd
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_WDR19_2nd
WD40_like
Motif
Other DBs
NCBI-GeneID:
5068547
NCBI-ProteinID:
XP_001465135
UniProt:
A4HYJ4
LinkDB
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Position
20:complement(5566..6804)
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AA seq
412 aa
AA seq
DB search
MLFLARDGMRGHLVDIETQTVLRNYAIGEVAKNALAYSPISQAVIAHQTRNCALFLSAAT
QQPLERSFTPELVTSCAVTRCGTFMVAGTANGTVLLWNMQSGDLIKSYKGHLRAVHCAAI
SADDSLVATVSEDSVCKVWNLATLASLRMREVVPRCIFNGHSLAATCCTFLHHSNVLLTG
SSDRTCRLVDTHTGEQLRTVTVGDAVTAVAVSLDDASIVAGTQKGFLFFSELYEPSLGLA
IESEHDGDQREAILRPPSADGHHSPVIFLRCLPSTPSLVLTASEGGAVLWFDIRNGRLVK
ECISPQKGRLLGCCVVPQAALLVKGICAPLQKHPVDPSRGNYRITQCALTTFQDRRGVKR
DRVGEDDVQLGPDEEADANALEEVRAKVVELRDLRAQLQRRLRKLSEAKSLR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttcttgcgcgagatggtatgcgcggccacttggtcgatatcgagacgcagaca
gtgctgcgcaattacgcgataggagaggtggcgaaaaacgctttagcttactctcccatc
agtcaagccgtcatagcgcaccaaacgcgcaactgtgctcttttcctctctgcggcaacg
cagcagccactcgagcgcagcttcacgccggagctcgtcacaagctgcgccgtcactcgg
tgcggcaccttcatggtggcgggcacagcgaacggcaccgttctcctgtggaacatgcag
tctggcgacctcatcaagagctacaagggccacctgcgcgcggtacactgtgccgcgatc
tcagctgacgactcgctcgtcgcgacggtgtctgaggactcggtgtgcaaggtatggaat
ctagcgacactggcctcgcttcgaatgcgcgaggtcgtgcctcggtgcatcttcaacggc
cactcactcgcggccacctgctgcactttcctccaccactcgaatgtgcttctcaccggc
tccagcgaccgcacctgccgtctcgtggacacccacacaggggagcagctccgcaccgtc
actgtcggggatgccgtcaccgcggtcgccgtgagccttgacgacgcctcgattgttgct
ggaacgcaaaagggattcttgttcttcagcgagctttacgagccatctctcgggcttgcc
atcgaatcagaacatgatggtgatcagcgagaggcgatcctccgaccacccagcgcggat
ggccaccactctccggttatctttttgcggtgtctgccctccacaccgtcgcttgtgctc
accgccagcgaaggtggcgccgttctgtggttcgatatccgaaacgggcggctcgtgaaa
gagtgcattagcccccaaaaggggcggctgctcggctgctgcgtggtaccgcaagctgcc
ctgctcgtgaaggggatatgcgcgccgctgcagaagcaccctgtcgatccctcacgaggc
aactatcgcatcacacagtgcgctctcacgacgttccaagacaggcgcggcgtgaagcgg
gaccgagttggcgaagatgacgtgcaacttgggcccgatgaggaggcagatgcgaatgct
ctcgaagaggttcgtgcaaaggtagtggagctgcgcgaccttcgcgcgcagctccaacgc
cgactgcgcaagctctctgaagcaaaaagcttaaggtaa
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