Leishmania infantum: LINJ_22_1480
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Entry
LINJ_22_1480 CDS
T01112
Name
(RefSeq) putative CCR4 associated factor
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
lif
Leishmania infantum
Pathway
lif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LINJ_22_1480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_22_1480
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LINJ_22_1480
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
LINJ_22_1480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
5069085
NCBI-ProteinID:
XP_001465663
UniProt:
A4I022
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All DBs
Position
22:628326..629342
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AA seq
338 aa
AA seq
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MTSKHTPQPYTMTANTPAWNPETRLPSLSKSAMIRDVWADNLEEEFATIRSLIKDYPFVS
LDTEFPGVVAKPVGSFKTTHEFYYQTLRCNVNLLKIIQLGITLLNDKGEVPEHCSTWQFN
FRFSIKEDVYAQDSIELLRHGGINFDYFNDFGIEVTHFAELLISSGLVLNSNVRWLAFHA
GYDFGYLIKVVCNKDLPEKEEEFLQTLHALFPSMFDLKYLLRFTDVSHSFGLDYLAESLK
LRRFGTAHQAGSDSLLTGHCYFKLLRDSFGNTAPVANNGVLYGLSEDAASSVTPSSAQAV
TQVNSNSHNFSSPIAYGNGGASSGTFPAAPLNSNMRRS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaagcacacccctcagccgtacacaatgacagcgaacacgccggcatggaac
ccggagacgcggcttccgtcccttagcaagtccgcaatgatccgagacgtttgggctgac
aatctcgaggaggagttcgccacgatccggtctctcatcaaggactacccgttcgtgtcg
ctagacacggaattccctggagtggtggccaagccggtgggcagcttcaagacgacgcac
gagttctactaccaaacgctgcggtgcaacgtgaacctcctcaagatcattcagctcggc
atcacccttctgaacgacaagggcgaggtcccggagcactgctccacctggcagttcaac
ttccgcttcagcatcaaggaagacgtttacgcgcaagacagcattgagcttctccggcat
ggcggcatcaacttcgactacttcaacgacttcgggatcgaggtgacgcactttgcggaa
ctgctcatctccagcgggctggtgctcaactccaacgtgcgctggcttgccttccacgct
ggctacgacttcgggtacctcatcaaggtggtgtgcaacaaggatcttccggagaaggag
gaggagttcctgcaaacccttcatgctctcttcccgagcatgtttgacctcaagtatctt
ttgcgcttcacggatgtgtcccactcctttggactggactacttagcggagagcctgaag
ctgcgccgcttcggcacggcgcatcaggccggcagcgattcgctcctcacgggccactgc
tacttcaagttgctgcgtgatagctttggcaacaccgcaccggtggccaacaacggcgtt
ctctacggtcttagcgaggatgcagcttcgtccgtcactcctagcagcgcgcaggcggtg
acgcaggtgaatagcaactcgcacaacttctcaagccccattgcgtacggcaatggcggc
gcaagcagcggtaccttccctgcggcccccctcaactctaacatgcgcaggtcgtga
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