KEGG   Leishmania infantum: LINJ_22_1480
Entry
LINJ_22_1480      CDS       T01112                                 
Name
(RefSeq) putative CCR4 associated factor
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
lif  Leishmania infantum
Pathway
lif03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LINJ_22_1480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lif03019]
    LINJ_22_1480
Messenger RNA biogenesis [BR:lif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LINJ_22_1480
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     LINJ_22_1480
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 5069085
NCBI-ProteinID: XP_001465663
UniProt: A4I022
LinkDB
Position
22:628326..629342
AA seq 338 aa
MTSKHTPQPYTMTANTPAWNPETRLPSLSKSAMIRDVWADNLEEEFATIRSLIKDYPFVS
LDTEFPGVVAKPVGSFKTTHEFYYQTLRCNVNLLKIIQLGITLLNDKGEVPEHCSTWQFN
FRFSIKEDVYAQDSIELLRHGGINFDYFNDFGIEVTHFAELLISSGLVLNSNVRWLAFHA
GYDFGYLIKVVCNKDLPEKEEEFLQTLHALFPSMFDLKYLLRFTDVSHSFGLDYLAESLK
LRRFGTAHQAGSDSLLTGHCYFKLLRDSFGNTAPVANNGVLYGLSEDAASSVTPSSAQAV
TQVNSNSHNFSSPIAYGNGGASSGTFPAAPLNSNMRRS
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgacgtccaagcacacccctcagccgtacacaatgacagcgaacacgccggcatggaac
ccggagacgcggcttccgtcccttagcaagtccgcaatgatccgagacgtttgggctgac
aatctcgaggaggagttcgccacgatccggtctctcatcaaggactacccgttcgtgtcg
ctagacacggaattccctggagtggtggccaagccggtgggcagcttcaagacgacgcac
gagttctactaccaaacgctgcggtgcaacgtgaacctcctcaagatcattcagctcggc
atcacccttctgaacgacaagggcgaggtcccggagcactgctccacctggcagttcaac
ttccgcttcagcatcaaggaagacgtttacgcgcaagacagcattgagcttctccggcat
ggcggcatcaacttcgactacttcaacgacttcgggatcgaggtgacgcactttgcggaa
ctgctcatctccagcgggctggtgctcaactccaacgtgcgctggcttgccttccacgct
ggctacgacttcgggtacctcatcaaggtggtgtgcaacaaggatcttccggagaaggag
gaggagttcctgcaaacccttcatgctctcttcccgagcatgtttgacctcaagtatctt
ttgcgcttcacggatgtgtcccactcctttggactggactacttagcggagagcctgaag
ctgcgccgcttcggcacggcgcatcaggccggcagcgattcgctcctcacgggccactgc
tacttcaagttgctgcgtgatagctttggcaacaccgcaccggtggccaacaacggcgtt
ctctacggtcttagcgaggatgcagcttcgtccgtcactcctagcagcgcgcaggcggtg
acgcaggtgaatagcaactcgcacaacttctcaagccccattgcgtacggcaatggcggc
gcaagcagcggtaccttccctgcggcccccctcaactctaacatgcgcaggtcgtga

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