Leishmania infantum: LINJ_23_1820
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Entry
LINJ_23_1820 CDS
T01112
Name
(RefSeq) putative Csl4p homologue
KO
K07573
exosome complex component CSL4
Organism
lif
Leishmania infantum
Pathway
lif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LINJ_23_1820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_23_1820
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
LINJ_23_1820
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
LINJ_23_1820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
TRAM
Motif
Other DBs
NCBI-GeneID:
5069282
NCBI-ProteinID:
XP_001465855
UniProt:
A4I0L4
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All DBs
Position
23:715668..716525
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AA seq
285 aa
AA seq
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MPVILHTGARVAPGDAIFTSPAAVTTSHDALEGAAAEEADVVPGEGCVVQYVERYVAPSA
PTASAPSAVVERSIIATRHGVAQWDGRLVSVFALASCALASAGGTGYATACGAGASVGSA
VSSPRHAVLGPRPGDTVHIRITRLNRLFAFGEILAVNWSWCSHRSFFSAAAGGGSNSGVF
KGILRQEDIRPFKPTKDQLLPPPLSLAFGVGDVVLAEVISQSDAHQCQLSTTGEGCGVVE
SFITTVEGQYGGQAKVKLEHIPGRRDAMMIRSTGEVVPRWCPLLL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcatcctgcacaccggtgctcgcgtcgcacctggtgacgccatcttcacatcc
cctgccgctgtgacgacctcccacgatgccctcgaaggcgctgctgccgaggaggcggat
gttgtgccgggtgagggatgtgtggtgcagtacgtagagcgatacgtagctccaagtgcg
ccaaccgcgtcggcgccgtcggcagtggtggagcgctcgattatagccacccgtcacggc
gtcgcgcaatgggatgggcgccttgtgtctgtctttgccctcgcctcctgcgctcttgcc
tcggccggtgggacagggtacgcgacagcgtgcggcgcaggcgcctccgtcggttctgca
gtctcgtctccgcgacacgccgtgctcgggccgcggccgggcgacacagtgcatatccgc
atcactcggctgaaccgcctctttgcctttggcgagatccttgccgtgaactggagttgg
tgtagccatcgcagtttcttctctgcggcggccggcggcggcagcaacagcggcgtcttc
aagggcatcctgcgacaggaggacatccgaccgttcaaacccacgaaagaccagctgctg
ccccctccgctgtcgctggctttcggggtgggggatgtcgtgctcgccgaggtcatctca
cagtccgacgcgcaccagtgccagctcagcaccactggcgagggctgcggcgttgtggag
agcttcataaccaccgtcgaggggcaatacgggggccaagcgaaggtgaagctggagcac
atacccggccgtcgcgatgccatgatgattcggagcacgggggaggtggtgccgcggtgg
tgcccgctgctgctataa
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