KEGG   Leishmania infantum: LINJ_23_1950
Entry
LINJ_23_1950      CDS       T01112                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
lif  Leishmania infantum
Pathway
lif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LINJ_23_1950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lif03019]
    LINJ_23_1950
   03041 Spliceosome [BR:lif03041]
    LINJ_23_1950
Messenger RNA biogenesis [BR:lif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     LINJ_23_1950
Spliceosome [BR:lif03041]
 Complex B
  Other components
   Prp19-related factors
    LINJ_23_1950
 Complex C
    LINJ_23_1950
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_Syf1_CNRKL1_C HAT_PRP39_N Suf NRDE-2 HAT_Syf1_M
Other DBs
NCBI-GeneID: 10966711
NCBI-ProteinID: XP_003392518
UniProt: E9AH17
LinkDB
Position
23:757470..759854
AA seq 794 aa
MDGDPRVSALQWEVTKEASTSPKTWAELARTTAAAAAADPVERANAVTLVYERALRAFAS
SYKLWTAYIGYRQQETSRLCGPNEWFQAVREVYERALAELPKMPMLWVGYMEFVVASEVP
RVTMTRHILARALSALPATQHHHLWKVAKRWCAMPVVPSATVRAVWRLYLSFQRSLHAKR
EYFQVLVQKGDFNGFLQECVHLGLPNKSNKGAVEERDLLLSDVSFWETVQTALQGKGWRF
TGDIGPLRELVALGKMHCASPVELSMAFAVFLYGQGHMQEGRQELRQLLDEAPEAQTLIS
LYHLAVEVEDQLVESFAVDPDLRRLDDAAYNGVVQHLFGDGDPLSHLERLAHEFPLLLNQ
AQLRNSPHNATLWLKRVELLQEDVYAGRSTFDDLVALYRQAIQQCTAGMSRVDGAAAQLF
SSCAQTLIRGGKLDSAIAVLSEGTWCVPFTSAALNVQLLGLLVEAQLMSSASPLSVRDAL
AERLTSGARSGASKRSRNGLLQSSAALPHVVHHPHAWIMWCDVCAAYDSANAAAWRRLVE
ALASSPAFSAEAACYVAHKAYICRQESVAVMMLERAVAATRQQPTAQLFVLEQYLSFLYT
RDGRQMPLHQFREVFSLVQQVTPVAIRTAPSAVIDLHVSCAYMEAAIGLYGTAVRMMQEI
SLVATAALRGRDEHLRVLQAILEHSITFTEQRRGYDSVRTYCGVLVQRLQHALLLQRVAL
HWAAIEKRSGNTAQAHLILDACGDSQDPSTEHGEVYWRLWESLCTSVEEFEKVARRRQQA
LIRFSKREGAKGAE
NT seq 2385 nt   +upstreamnt  +downstreamnt
atggacggcgacccgcgcgtgagcgccctacaatgggaggtgaccaaagaggcctcgacg
tcgcccaagacgtgggcggagctggcccgcaccaccgctgcagccgccgcggctgatccc
gtggaaagggcgaacgcggtgacgctagtgtacgagcgcgccttgcgtgcgttcgcctcc
tcctacaagctgtggacggcctacattggctatcgccagcaggagaccagtaggttgtgc
gggccgaacgagtggttccaagcggtgcgcgaggtgtacgaacgggcgttggccgagctt
ccgaagatgccgatgctctgggtcgggtacatggagtttgtcgttgcctctgaagtgccg
cgtgtgacaatgacgcggcacatactcgcgcgcgccctgtccgcgctgccagcgactcag
catcatcatctctggaaagttgcgaagcgctggtgcgctatgcccgtcgtgcccagtgcc
accgtgcgggctgtctggcggctttatctgtccttccagcgctccctgcatgcgaagcgg
gagtactttcaggtgctcgtgcagaagggcgacttcaatgggtttctgcaggagtgcgtg
cacctggggctgcccaacaagtcgaataagggcgccgtcgaggagcgtgacctgctcttg
agcgacgtgagcttttgggaaacggtgcagacggcgctgcagggaaagggctggcgcttc
acaggcgatattggcccgctgcgtgagctggtcgctctcgggaagatgcactgcgcctcc
ccggtcgagctctcaatggccttcgccgtttttctttacggtcaggggcacatgcaagag
ggccgacaggaactgcgccagctgctggacgaggcaccggaggcccagacgctgatctcg
ctctaccaccttgccgtggaggtggaagaccaactcgtggagtctttcgccgtggatccc
gatctcagacgcctcgacgacgccgcgtacaacggtgtagtgcagcatctcttcggtgac
ggcgacccactcagccacctcgagcgacttgcgcacgagttcccgctgctcctcaaccag
gcgcagctgcggaacagcccgcacaatgcaacactgtggctgaagcgtgtggagctgctg
caggaggacgtctacgccggccgctccacttttgacgatctcgtcgctctctaccgccag
gctattcagcagtgtactgcaggtatgtcgcgtgtagacggcgcggcggcgcagctgttc
tcttcttgtgcccagaccctcattcgtggcggcaagctggacagcgccatagcggtactt
agtgagggcacgtggtgcgtgccattcaccagtgccgcgctcaacgtgcagctccttggt
cttcttgttgaggctcagctgatgtcgtccgcctcgcccttgtcagtgcgggatgcgctc
gcggagagactgaccagcggcgctcgcagtggcgcttcaaagcgcagccgaaacggcctt
ctgcagtcgagtgcagccctgccccacgtggtgcaccacccacacgcgtggatcatgtgg
tgtgacgtttgcgctgcctacgactcggccaacgcggccgcttggcgccgccttgtcgag
gcactcgccagctcgcccgctttctctgcggaagccgcctgctacgtggctcacaaggcc
tacatctgtaggcaagagtccgttgcggtcatgatgctggagagggccgtcgctgccacg
cggcagcagcctaccgcgcagctttttgtgctggagcagtacctctccttcctgtacacc
cgcgacggccgacagatgccgctgcatcagttccgcgaagtgttcagccttgtgcagcaa
gtgaccccggtcgccatacgcactgcaccgtctgctgtcatcgacctgcacgtcagctgc
gcttacatggaggcagcgatcggcctatacgggacagctgttcgcatgatgcaggagatt
tccttagtcgctactgcagcgctgcggggtcgtgatgagcacctccgtgtcctgcaggcc
attcttgagcactctatcaccttcacagagcagcgcaggggctacgattcggtgcgcacg
tactgcggggttcttgttcagcgcctccagcacgcactcctgctgcagcgtgttgcgctt
cactgggccgcgatcgagaagcgctctggcaacacggcacaggcgcatcttatcctcgac
gcgtgcggggacagccaggacccgtccacggagcatggcgaggtgtactggcgactgtgg
gaatctctctgcacaagtgtggaggagtttgagaaggtggctcggcgacgccagcaggca
ttgatccgcttcagcaaacgcgagggtgcgaagggagcggagtag

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