Leishmania infantum: LINJ_24_1010
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Entry
LINJ_24_1010 CDS
T01112
Name
(RefSeq) putative replication factor C, subunit 1
KO
K10754
replication factor C subunit 1
Organism
lif
Leishmania infantum
Pathway
lif03030
DNA replication
lif03410
Base excision repair
lif03420
Nucleotide excision repair
lif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LINJ_24_1010
03410 Base excision repair
LINJ_24_1010
03420 Nucleotide excision repair
LINJ_24_1010
03430 Mismatch repair
LINJ_24_1010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lif03032
]
LINJ_24_1010
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_24_1010
DNA replication proteins [BR:
lif03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LINJ_24_1010
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LINJ_24_1010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
AAA_5
Zeta_toxin
AAA_14
RuvB_N
AAA_16
AAA_22
AAA_28
nSTAND3
NPHP3_N
AAA_assoc_2
RNA_helicase
NTPase_1
AAA_7
AAA_6
AAA_18
Motif
Other DBs
NCBI-GeneID:
5069356
NCBI-ProteinID:
XP_001465928
UniProt:
A4I0T7
LinkDB
All DBs
Position
24:351967..353949
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AA seq
660 aa
AA seq
DB search
MAAVSTSATGTANPVPSRSELWADKYKPRSIAEMCYPVCANKLKAWLETFTPIGSPGDDP
KKPHGVLLSGSPGVGKTTTVYVVAHELGRTVVEYNASDFRSRKSLKENVSDLISNRAFSV
SATSYTNVILLMDEVDGCDIGGVGEVIEMLKSTRIPILCTCNDRWHPKLRSLLNYVEDMR
FSHPPCNIVANYLCDRVLAREGISLSKPLLQDIIKNSGSDIRNMLNNLQLWCLSRTSLEQ
RQLAECAAQSTKDSDAGLFDAAEYFLLQGTSRGERHSIAEMQACYYNADLVDMFVQENYL
HYNPQPVDGRDWMEAVSQAATSISRSDAAQSIMYYQQNWSVSRFHVLSSSIAPCVYTRGK
YETFMTGQQKFFDMQRPVKFPTWLGHNSSANKNRRLLRCIAMQASHPAKGVSGSQEDVVA
DYIPHGWERPLTAPLATKGKDGVAEVIAFMDQYHLMRDDWDLVQALPHYKHMQSPSPTTP
PANIATAVKSAFTREFNKTHRFDSFAKSTLKRGDGETQDDDEGDPGNGAGGNRKAGKVVA
DGVTAVSVTGSSDAAATKKKGKAAVGAATTSTTAAAARKPRAKKSAPADGAARPTAKKKA
ATSSTRATAKASTAKTTAKRKRARAASSESETESVSSSPSSSSSSSASSSSSSSDVSDSE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgtctacatcggcgactggcacggcgaaccccgtgccgagtcgcagcgag
ctgtgggcagacaagtacaagccgcgctccattgccgagatgtgctacccggtctgcgcg
aacaagctaaaggcgtggctggagaccttcacaccgatcggtagccccggcgatgatccg
aagaagccgcatggcgttctcctgtccgggtctccaggtgtgggcaagacgacgacagtg
tacgtggtagcgcacgaactcggccgcaccgttgtggagtacaacgcgagcgacttccgc
agccgcaagtcgctcaaggagaatgtgtcggacctcatcagcaaccgcgccttttccgtg
agcgcgacgtcgtacacgaacgtgattctgttaatggacgaggtggacggctgcgacatt
ggcggtgtcggcgaggtgatcgagatgctcaagtccacccgcatcccgatcctgtgcacg
tgcaacgatcgctggcaccccaagctgcgctcgctgctcaactacgtggaggacatgcgc
tttagccacccaccgtgcaacatcgtggcgaactacctttgcgaccgtgtcctggcgcgc
gagggtatttcgctctccaagccgctcctgcaggatattatcaagaactccggcagcgac
atccgcaacatgctcaacaacctgcagctctggtgcctgagccgcacctcgctcgagcag
cggcagctggccgagtgcgccgcgcagtcgacgaaggacagcgatgccggcctcttcgac
gccgctgagtacttcttgctgcagggcacgtcgcgtggggagcggcactccatcgcggag
atgcaggcctgctactacaacgccgacctagtcgacatgtttgtgcaggagaactacctg
cactacaacccgcagccggtggatgggagggattggatggaggctgtctcacaggctgcc
acatcgatctcgcggtcggacgcggcgcagagcatcatgtattatcaacagaactggtcc
gtgtcccgcttccacgtcttgtcctccagcattgccccatgtgtgtacacgcgcggcaag
tacgagaccttcatgacggggcagcagaagttcttcgacatgcagcgaccggtgaagttc
ccgacgtggcttgggcacaactcctccgcgaacaagaatcgccgtctgctgcgctgcatc
gccatgcaggcgtcgcacccggcgaagggcgtgtcagggagccaagaggatgtggtggcg
gactacataccgcacggctgggagcgcccgctgacggcgccgctggcgacgaaggggaag
gacggcgttgccgaggtgatcgccttcatggatcagtaccacctcatgcgcgatgactgg
gacctcgtgcaagcgttgccacactacaagcacatgcagtcgccgagccccacgacgccg
ccggccaacatcgccaccgccgtcaagagcgccttcacgcgtgagttcaacaagacgcat
cgctttgacagcttcgcgaagagcacgctgaagcgcggcgatggggagacgcaagacgac
gacgagggcgatccgggcaacggcgccggtggcaatcgcaaggctggcaaggtggtcgcg
gacggcgtgacggctgtgagcgtcacaggcagcagtgacgctgctgccacgaagaagaaa
ggcaaagcggctgtgggcgctgccaccacatcgacgacggcagccgcggcacgcaagcca
cgggccaagaagagcgccccggctgacggggctgccaggccgacggcgaagaagaaggcc
gccaccagctcaacgcgggccacggccaaggcatcgacggcgaagacaacagcaaagcga
aaacgcgcgcgcgcggcgtcctcggagagtgagacagagagcgtgtcgtcatcaccatcg
tcgtcctcctcctcatctgcgtcctcttcgagcagcagcagtgatgtctccgacagtgag
tag
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