KEGG   Leishmania infantum: LINJ_25_0440
Entry
LINJ_25_0440      CDS       T01112                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
lif  Leishmania infantum
Pathway
lif03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LINJ_25_0440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lif03009]
    LINJ_25_0440
Ribosome biogenesis [BR:lif03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    LINJ_25_0440
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Utp13 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 EIF3I Beta-prop_RIG_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_VPS8 Ge1_WD40 Utp12 WD40_RFWD3 Beta-prop_ACSF4 Beta-prop_DCAF12 Beta-prop_IFT140_2nd Beta-prop_IFT122_2nd UTP15_C
Other DBs
NCBI-GeneID: 5069508
NCBI-ProteinID: XP_001466077
UniProt: A4I186
LinkDB
Position
25:complement(126316..129369)
AA seq 1017 aa
MEGKNCFRTRWTQEPIFSGGALASLALPVSDPAASSALSTSAAPEECLVMACGDTVNVVR
ATSGEVLCRYTLPVEDVILHIDAVTVPKASDDGGKDATSGDEGEARAKRDASAAEKSATT
KKAPKKKAGAGKTVKPIEEDEENAGQAEKKVAVPSVAASSSDAAASQGDRELAAPAGSYV
AVGTRSLQVYVLRVDARVESPASPSPSPSAEKGVAADAASEKGNAAGAEGDDADVVGAAT
ASGTLVLYSIELQRNWTAAQHAISVVHFSQSGTYLVSGATDGSVKVWNVFHHHLTHNLVC
AHSSLVQSVCLDPSEAYLAVGSFEGHVTVFDFVAKRIVAAGRPHVQAVESMIFNDALTHV
YSIARDRRLALNKMMFSENRKSTELKEVRAIAVKEHVSSAAFESAGLLHVGAMDGVVSTY
RVSEDEAVQLVRRLPKPPSADAEDGAEEAFVRSLLVAGVPKGTNMRRLRDSVVQDAPHAP
DTSSLYVGDAGFSIQHLCPSSAERSQYEVARTVVGFLDQLLDVKLFPEASPLHRAVVTNS
KDVRLYASDGCVSSKTLRGHSDVVLCCAVSSNGAWIATGAKDKEVRVWSTESCETVVRGV
GGHTAEVTSLSFNGRQTDTYLLLFSVSSDENVRMWDIGVPLAERVSAKQPRSRVEEIQHR
SGVNAAHTGPIYTVAVAPNDQYVATGGKDKSVNVWNITGKKMYREASLKGHRRGISSLAF
SPVDRVLASASNDGSVRLWSLVSLTCLKSMQVDRTSVLQVGFFNNGTQIVTSNAEGVLRV
WAIASSESVWAAEAHTEKIWALAVEERPSSGETIFYSGAADGVLIATEDYTAEEVARVKE
DRHQMILQEQALSNALRKGEFSEAFMLALRLSHPRHLRQVLVRWCAKDARQCENTLRGEL
LPALDAEQMTRLLQYTREWITNSRHCTVATLVLYVLISSHHFEAVAQVPSMASLIEPLLA
YTRKHSQRQHDLLRRTYYIDYVIRGLAPNVLTSLPPFVHHGEGRREEPPLAKRMRVE
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggaagggaagaactgcttccgcacgcgatggacgcaggagcctatcttcagcggcggc
gcgttggcctctcttgcgcttccagtgtcagaccccgctgcgtcgtccgcactttccacg
tcggccgctccggaggaatgcctcgtcatggcgtgcggcgacaccgtgaacgtcgtgcgt
gcaacaagtggagaggtgctgtgcaggtacacgttgccagtagaggatgtgattctccac
attgacgccgtgacggtacccaaggcgtcggatgacggcggcaaagacgccacaagtgga
gatgagggagaggcgcgggcgaagcgcgacgccagcgctgcggaaaagtcggccacgacg
aagaaggctcccaagaagaaggccggagccggcaagacagtcaagccgatcgaggaggac
gaagagaacgctggccaagcggagaagaaggtggccgtgccgtccgtggcggcgtcctca
agcgacgcggctgcctctcaaggcgacagggaacttgctgcaccggctggcagctacgtt
gcggttggcacgcgctctctgcaggtctacgtgttgcgcgttgacgcccgcgtcgagtcg
ccggcctcgccctcgccctctccttcagcggagaagggtgtcgctgccgacgccgcttct
gagaaaggcaacgctgcaggggcggaaggcgatgatgcggatgtagtcggcgcggcaaca
gctagcggcacccttgtgctgtactcgatcgagctgcagcgaaactggacggcggcgcag
catgccatctcggtcgtgcacttctcccagagtggcacctacctcgtctcgggtgccacg
gatggcagcgtgaaggtgtggaacgtttttcaccatcacctgacgcacaacttggtgtgt
gcccacagctccctcgtgcagagcgtctgcctcgaccccagcgaggcctacctcgccgtc
ggctccttcgagggacacgtcaccgtcttcgactttgtggcaaagcggatagtggcggca
gggcgcccgcacgtgcaggcggtcgagtccatgatcttcaatgacgcgctcacacacgtc
tactcgatcgccagggatcgccgtctcgctctcaacaagatgatgttcagcgagaaccgc
aaatcgacggagctgaaggaggtgcgcgcgattgcagtgaaagagcacgtgtcgagcgcc
gccttcgagagcgccgggctacttcacgttggcgccatggacggcgtggtcagcacctac
cgcgtgagcgaggacgaggcggtacagcttgtgcgccggcttccaaagccgccgtccgcg
gacgccgaggacggcgccgaggaagcgtttgtgcgctctctgcttgtggccggcgtgcca
aagggcacgaacatgcgccgcctgcgcgactctgtggtgcaggacgcgccgcacgcgccg
gacacctcctccttgtacgttggcgacgcaggattcagcattcagcacctgtgcccctcg
tcggcggagcgcagccagtacgaggtggctcgcacggttgtcggctttctcgatcagctg
ctcgacgtgaagctgtttcctgaggcctcgccgctgcaccgggctgtggtaaccaacagc
aaggatgtgcgcctgtacgcctcggatggttgcgtctcctcgaagactctgcgcggccac
agtgacgtggtgctctgctgcgccgtgagcagtaacggggcgtggatcgccaccggggcc
aaggacaaggaggtgcgcgtgtggtcgaccgagagctgcgagacggtcgtgcgcggtgtt
ggcgggcacacagcggaggtgacatcgctatctttcaacgggaggcagacggacacctac
ctgctgctcttctctgtttccagcgacgagaatgtgcgcatgtgggacatcggcgtccct
ctggcggagcgtgtgtcggcaaagcagccgcggtcccgcgtggaggagatacagcaccga
agcggcgtgaacgcggcccacacgggccctatctacaccgtggctgttgcgcccaacgac
cagtacgtcgcgactggcggcaaggataagtcggtgaatgtgtggaacatcacaggcaag
aagatgtaccgcgaggcctccttgaaggggcatcggcgtggcatctcatcccttgccttc
tcgccggtcgatcgcgttctggcatcggcctcgaatgacggatcagtgaggctgtggtcg
cttgtgtcgctgacgtgcctgaagtcgatgcaggtggaccgcacctcagtactgcaggtg
ggcttcttcaacaacggcacgcagattgtcacgagcaacgcggagggcgtgctgcgtgtg
tgggccatcgcgtcctcggagtcggtctgggcggcggaggcgcacacggagaagatatgg
gccttggcggtcgaggagcgcccctcctcgggcgagacaatcttctactccggtgccgcc
gacggcgtgttgatcgcgaccgaggactacaccgctgaggaggtggcccgcgtcaaggaa
gaccggcaccagatgatcctgcaagagcaggcgctctccaacgcccttcgcaagggcgag
ttctcagaggcgtttatgctggccctgcgactgagtcacccgcgtcatctccgccaagtg
ctcgtgcgctggtgcgccaaggacgcacgccagtgcgagaacacgcttcgcggcgagctt
ctgcccgcccttgatgcggagcagatgacgcggctgctgcagtacacgcgagagtggatc
acgaacagccgtcattgcacggtggctactctggtgctctacgtgcttatctcctcacac
cactttgaggctgtcgcacaggtgccgtcaatggcgtcgctgatcgagccgctgctggct
tacacgcgcaagcacagccagcgccagcacgacctgctccggcgcacgtactacatcgac
tacgtcatccgcggtcttgccccgaacgtgctgacctcgcttccgccattcgtgcatcac
ggtgaagggcggagggaggagccgccgctggcaaagcgcatgcgcgtcgagtga

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