KEGG   Leishmania infantum: LINJ_25_1350
Entry
LINJ_25_1350      CDS       T01112                                 
Name
(RefSeq) DNA-directed RNA polymerase II
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
lif  Leishmania infantum
Pathway
lif03020  RNA polymerase
lif03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LINJ_25_1350
  09124 Replication and repair
   03420 Nucleotide excision repair
    LINJ_25_1350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lif03021]
    LINJ_25_1350
   03400 DNA repair and recombination proteins [BR:lif03400]
    LINJ_25_1350
Transcription machinery [BR:lif03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     LINJ_25_1350
  RNA polymerase III system
   RNA polymerase III
     LINJ_25_1350
  RNA polymerase I system
   RNA polymerase I
     LINJ_25_1350
DNA repair and recombination proteins [BR:lif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LINJ_25_1350
SSDB
Motif
Pfam: RNA_pol_N Yippee-Mis18 UBA
Other DBs
NCBI-GeneID: 10966540
NCBI-ProteinID: XP_003392598
UniProt: E9AH97
LinkDB
Position
25:complement(508102..508356)
AA seq 84 aa
MIIPVRCYSCGKVVGNLYEQYQRLLDQDYTEAEALDALHLDRYCCRRMILSHIDLIDDLI
PYSVPVTGTMQMMGPLQMPTPHRR
NT seq 255 nt   +upstreamnt  +downstreamnt
atgatcatcccagtgcgttgctactcgtgcggtaaggtggttggcaacctctacgagcag
tatcagcggcttttggatcaggactacacggaggccgaggcgctggatgcgctgcatctg
gatcgctactgctgccgtcgcatgatcctctcccatattgatctgattgacgacctcatt
ccttatagtgtacctgtgacgggcaccatgcagatgatggggccgctgcagatgcccacg
ccgcaccgccgctga

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