Leishmania infantum: LINJ_25_1370
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Entry
LINJ_25_1370 CDS
T01112
Name
(RefSeq) conserved hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
lif
Leishmania infantum
Pathway
lif03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
LINJ_25_1370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_25_1370
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
LINJ_25_1370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
T5orf172
Motif
Other DBs
NCBI-GeneID:
5069603
NCBI-ProteinID:
XP_001466168
UniProt:
A4I1H7
LinkDB
All DBs
Position
25:complement(512748..514865)
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AA seq
705 aa
AA seq
DB search
MDTRFHCVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHNGELVNGARRTSRRGRPWTIVCC
VSGFPDDRAALKFEWCWQHPTASARLRHAIDILTGLRRLPYAVATLHLLVRASLFCRLDL
TLHIFESALLQEAAARAEVLLARRRGAFAVGGGLRASSPRVGTQQHSQRSSSLQGQADGV
ATPPLPALDSKGELQDASTAAALATTTAASHLLPPLTPSLLFHVEDTTRQAFEDAYLSHD
RCLLLPSVGMGVDVGEAGKEGSHMSASAGTSCPYDVSLLSQAARAEWSNASFASDSDDED
TRRFAPYCPSTGSRTPSPQRVHTAASPALLGYRSEERAGDGVLEASPGSSIGCGAALRSF
SSPPPPRASSPRSASCPPLYTGINASASLAVDAPHGGVTDACTSSPAAAPAPQPRIPLRF
ADYGEVDFARAHAEEQHRLHHGLLPCSLCTLPLQPSCVAYCSRAPFCTLRCHLSCLAMWM
LYAEAEAAATVDGTDKSPALLSQAPPAPISPLRRLIPSQPCPCPLCGVLLHWGSLVKELK
KRVVVERRLHAAQRRIRMEQRWQARLAHIDHTKRSTSAAMRRRQRTRVGAAALAKGAGEA
PGAASTVRASTMHVGPARRDAPRVSSPSCLGEPTLTSFAAAASCPSPSTSLAALSPAASA
SPISRHNGHSNTVTATNTAVAAAAAVSDASLLSLTDFCEEDWLLP
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggacacgcgcttccactgcgtgtacttgctcaccagtctcgaccctcagtgcgagggc
gacttctacattggctacaccgtgaaccccctgcgacggctgcggcagcacaatggcgag
ctcgtgaacggcgcccgacgcacgagtcgccgtggtcggccgtggacgatcgtgtgctgt
gtctcgggtttccctgacgatcgagccgcgctgaagttcgagtggtgctggcagcacccg
accgcatccgcgcgactgaggcacgcgatcgacattctcacgggtctgcggcggcttccc
tatgcggtggccacgctgcacctcctcgtgcgcgcctccctcttttgccggctggatctg
acgctgcacatctttgagtcagcactcctacaggaggcggcagccagggcggaggtgctc
ctggcgagacgccgtggcgcctttgccgtgggcggagggctgcgagcctcgtcaccgcga
gtgggcacacaacagcattcgcagagaagctcgtccttgcaagggcaggcagacggtgtt
gcgacaccgccgttgcccgcgcttgactctaaaggggaactgcaagatgcgtcgacggca
gccgcactcgcaaccaccacggctgcttctcaccttctccctccgctcaccccgtctctc
ttgttccacgtcgaggacacaacgcggcaggccttcgaggatgcctacctgagtcacgat
cggtgcctgctgcttccaagcgtgggcatgggcgtcgacgtgggagaagcagggaaggag
ggcagccacatgagcgcgtctgctggaacctcctgtccgtatgatgtatcgttgctgtcc
caagcggcgcgggcggagtggtcaaacgcctccttcgcctctgactcggacgacgaggac
acacgacggttcgcaccctactgcccctctacagggtcgcgcacgccatctccgcagcgc
gttcacacggcggcctcgccggcccttctcggctaccgcagtgaggagcgcgcaggcgac
ggcgtcctggaagcgagcccaggcagcagtattggctgcggtgcggctttgcgttccttc
tcctctcctccgccaccacgagcgtcttcgccgcgatcggcatcgtgccctccactgtat
acaggcatcaacgcatccgcctcacttgcagtggatgcaccccatgggggcgtcacggat
gcctgcacttcctccccagcggcggcacccgccccacagccccgcatcccactgcgcttt
gcggactatggcgaggtagactttgcgcgggcccacgcagaggagcagcatcgcctccat
cacgggctactgccgtgcagtctctgcacgttgccgctgcagccctcgtgtgtggcgtac
tgcagccgcgcacctttctgcaccctacgctgtcacctgagctgcttggcgatgtggatg
ctgtatgccgaggcagaggcggcggctaccgtagacggcactgataaaagccctgcgctg
ctttcgcaagcgcctccggcaccgatatcaccgctccgtcgtctgatcccttcccagcca
tgcccgtgccccctctgcggtgttctcctgcactggggctcgcttgtgaaggagttgaag
aagcgagtggttgtggagcggcgcctgcacgcggcacagcggcgcattcgcatggaacag
cggtggcaggcgcgcctggcgcacattgaccacacaaagagaagcaccagtgcggcgatg
cggcgtcggcagcggacgagggtgggcgccgccgcactagcaaaaggcgccggcgaggca
cccggtgccgcttccactgtacgagcgtccacgatgcacgtggggcccgcacggcgcgat
gctccgcgggtgtcgtcaccgagctgtttgggtgaaccgaccctgacatcattcgcagct
gcggcctcctgcccctctccctccacctctttggcagcgttgtctcctgcggcgagtgcg
tcgccgatctcccgccacaacggtcactcgaacaccgttaccgccactaatactgccgtt
gctgctgctgcggcggtgtctgacgcgtctctcttgtctctgacggacttctgcgaggag
gactggctgctgccatga
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