Leishmania infantum: LINJ_25_1780
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Entry
LINJ_25_1780 CDS
T01112
Name
(RefSeq) conserved hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
lif
Leishmania infantum
Pathway
lif03018
RNA degradation
lif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LINJ_25_1780
09123 Folding, sorting and degradation
03018 RNA degradation
LINJ_25_1780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_25_1780
03041 Spliceosome [BR:
lif03041
]
LINJ_25_1780
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LINJ_25_1780
mRNA degradation factors
5'-3' decay
Lsm complex
LINJ_25_1780
Spliceosome [BR:
lif03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
LINJ_25_1780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
5069644
NCBI-ProteinID:
XP_001466209
UniProt:
A4I1L8
LinkDB
All DBs
Position
25:complement(665060..665455)
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AA seq
131 aa
AA seq
DB search
MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDFDDGAAEEDNGGV
VDEGVSTAFSSGGTASGALPPLEEVQLGVMMLRGADVVSIAAIDVYEEAGTNVKDWRGRD
MPPATAVARSS
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccagtacctgcgcaagcgtgtctccgtggtgacggtagatggtcgtaatctc
gtcggcgtactccacgcagccgatcagctgctgaacatcgtactcacatcctgcgtcgag
cgcactggcgcgccgtacgatttcgacgatggcgcggccgaagaggacaacggtggcgtt
gtcgatgaaggtgtctccacggctttcagcagcggtggcactgcaagcggcgctctgccg
cccctggaagaggtacaactaggcgtgatgatgctgcgcggtgccgacgtcgtttccatt
gctgccatcgacgtgtacgaggaggctggcacaaacgtgaaggattggcgaggacgggat
atgccgcctgctactgctgtagcgaggtcgtcgtga
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