KEGG   Leishmania infantum: LINJ_25_1780
Entry
LINJ_25_1780      CDS       T01112                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
lif  Leishmania infantum
Pathway
lif03018  RNA degradation
lif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LINJ_25_1780
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LINJ_25_1780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lif03019]
    LINJ_25_1780
   03041 Spliceosome [BR:lif03041]
    LINJ_25_1780
Messenger RNA biogenesis [BR:lif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LINJ_25_1780
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LINJ_25_1780
Spliceosome [BR:lif03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LINJ_25_1780
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 5069644
NCBI-ProteinID: XP_001466209
UniProt: A4I1L8
LinkDB
Position
25:complement(665060..665455)
AA seq 131 aa
MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDFDDGAAEEDNGGV
VDEGVSTAFSSGGTASGALPPLEEVQLGVMMLRGADVVSIAAIDVYEEAGTNVKDWRGRD
MPPATAVARSS
NT seq 396 nt   +upstreamnt  +downstreamnt
atgctctcccagtacctgcgcaagcgtgtctccgtggtgacggtagatggtcgtaatctc
gtcggcgtactccacgcagccgatcagctgctgaacatcgtactcacatcctgcgtcgag
cgcactggcgcgccgtacgatttcgacgatggcgcggccgaagaggacaacggtggcgtt
gtcgatgaaggtgtctccacggctttcagcagcggtggcactgcaagcggcgctctgccg
cccctggaagaggtacaactaggcgtgatgatgctgcgcggtgccgacgtcgtttccatt
gctgccatcgacgtgtacgaggaggctggcacaaacgtgaaggattggcgaggacgggat
atgccgcctgctactgctgtagcgaggtcgtcgtga

DBGET integrated database retrieval system