Leishmania infantum: LINJ_25_1920
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Entry
LINJ_25_1920 CDS
T01112
Name
(RefSeq) conserved hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lif
Leishmania infantum
Pathway
lif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LINJ_25_1920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_25_1920
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LINJ_25_1920
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
LINJ_25_1920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
5069658
NCBI-ProteinID:
XP_001466223
UniProt:
A4I1N2
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Position
25:complement(711823..713727)
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AA seq
634 aa
AA seq
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MSNIKKVQTEADRLLKKVNEGLDAYDELHEKLANAPNASAKERLEGDLKRELKKLQRHRE
AMKSFMQNDDYKEKTKMQVSRKKIEERMETFRAIEREMKTKAFSNEGLASAALERADSAT
EQWLKDAIEEGRKKIELLEYEVQKANNGRVRRGKQQQKSEYQIRLENLQTHFFKWESLLR
MVNNEELDTDEVDDLQEPIQKVLEDDVDLEVMEDMSIYDSFDIPEPKAKPVVPFDVSDYE
DKKVQSPKTTAKAKTPTSTVQAKPSPFITSPKETAASSTPVPSSTQQPALAQTPQQLLPP
TASSPADDDIGEEEPVPEWMDDDMDTANDDTFGDDAMSGGFTIGSLAEMASATSKVTQDW
EKSQKPIGSPEPKTVKVTDSGHGAPEEKPKPTPPAAAPTPNAWERRAAEQQSRQKAQQQQ
QQKQAPDAASPVAPFGPVAATAEASAPEAVTTSLIAPAAATSPSTPVGSVDTDPSQPFPP
IPGAAPGSKFTPKKIHELLDMSLGNLPHTLDVQRQRPYEPPNAIDAIPYFPQEVLPVLSN
KDVYHQMDLDTLFFIFYYHQKSYQQYFAAKELKARSYRYHTKQQRWYQRLERPQTTTETE
ERGSYTFFDFEDKWDHDRIDDFLFEYKYLENELH
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacatcaagaaggtgcagacagaggcagaccgcctcctcaagaaggtcaatgag
ggcctcgacgcgtacgacgagctgcacgagaagctagctaacgcgcccaacgcgagcgcc
aaggaacgcctcgagggtgacctaaagcgtgagcttaagaagctacagcgccaccgtgag
gccatgaagagcttcatgcagaacgacgactacaaggagaaaacgaagatgcaggtgtcg
cgcaagaagatcgaagagcgcatggagacgtttcgtgcgatcgagcgagaaatgaagacg
aaggccttcagcaacgaggggttggcctccgccgcgctggaaagggcggactccgccacg
gagcagtggctgaaggacgcgattgaggagggacgcaaaaagatagagctgctcgagtac
gaggtgcagaaggcgaacaatggccgcgtacgccgtgggaagcagcagcagaagtccgag
taccagatacgcctcgagaacttgcagacccatttcttcaagtgggagtcgctgctgcgc
atggtgaacaacgaggagctcgacaccgacgaggtggatgacctgcaggaaccgattcag
aaggtgctcgaggacgacgtcgatttggaggtgatggaggacatgtccatatatgacagc
ttcgacatcccagagccgaaggcgaagcccgtcgtgccatttgacgtcagcgactacgaa
gacaagaaggtgcagtcgccgaagacgacggccaaggccaagacgccaacgtccacagtg
caggctaagcccagcccgttcatcacatctccgaaggaaacggcggcgtcctctacaccg
gtcccctcgtcgacgcagcaaccggcgctcgcgcaaacgccgcagcagctgctacccccc
accgccagcagcccggcggacgacgacatcggtgaggaggagccagtgccggagtggatg
gatgacgacatggacaccgccaacgacgacacctttggcgatgacgccatgagcggtggt
ttcacgatcggctcgctcgccgagatggcctcggcaacgagcaaggtgacgcaggactgg
gagaagtcgcagaaacccatcgggtcgccggagcccaagacggtgaaagtgaccgactcc
ggccatggagcaccagaggagaagccgaagccgactccgccggccgcggcgccgacgccg
aacgcgtgggagcgacgcgccgccgagcagcagagccggcagaaagcacagcagcagcag
caacagaagcaagccccggatgctgcctcgccggtggcgccgttcgggccagtcgctgcg
accgccgaagcgagtgcgccggaggcggtgacaacttcgctaattgccccggccgcagcg
acgtctccgtcgaccccggtcggcagcgttgacacagaccccagccagcccttcccgccc
attcctggtgccgctcctggttccaagttcacgccgaagaagatccacgagctcttggat
atgtctcttggcaacctgccgcacacgctcgacgtgcagcggcagcgcccctacgagccg
ccgaacgcgatcgatgcgatcccgtacttcccgcaggaggtgctgccggtgctgtcgaac
aaagacgtctaccatcagatggatctcgacacgctcttcttcatcttctactaccaccaa
aagtcgtaccagcagtacttcgccgccaaggagctcaaggcccgctcctaccgctaccac
acgaagcagcagcggtggtaccagcggctggagcgtccgcagacgacgacagagacggag
gagcgcggctcgtacaccttctttgacttcgaggacaagtgggaccacgaccgcatcgac
gactttctctttgagtacaaataccttgagaatgaactccactga
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