KEGG   Leishmania infantum: LINJ_25_1930
Entry
LINJ_25_1930      CDS       T01112                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
lif  Leishmania infantum
Pathway
lif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LINJ_25_1930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lif03041]
    LINJ_25_1930
Spliceosome [BR:lif03041]
 Complex C
  Other components
   Step II factors
    LINJ_25_1930
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD_LRWD1 Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_EIPR1 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 5069659
NCBI-ProteinID: XP_001466224
UniProt: A4I1N3
LinkDB
Position
25:complement(714778..716343)
AA seq 521 aa
MFPTDRPPTPADMARLQAFGAEGRAEAELATDVYLHSLMKRRSDSVAELLALYTSPEDAR
KAYPDPPPSLLQVTDDASSANTEKASEAATGTGSPSSCAMAQALKRARRENAAAALSASS
CAAAAATAAARPVPAVDGPPTAVFVNGVERVNYLGKSFLEPPSSVLEHEQSTKQKACQPP
RTMRGVFKVPEGCEAAPNAASAPASSSFLADHGGSSGGERRSGKASGVQQLRWAPPAYGH
LLFSGDIGGQCRLWNSSTRQLLATFAAHSQPIKSLEVTTNAAIMSTGSVDGTVAMWDVEA
GVCTHVLTNPDSLPVVQHLHHPSDEAHLLLAAVDKKVVLYDVRVGCSKYQREYTGHMGTI
FNLTLLSNGSKMLTTSEDRTLRTWDYRSPVQIKQFADAAMHAITHVLHHPTQPEFLAAQS
LNNKVIVFRDDGGGRLRLLHDCEFTGHTISGTRCQLSFSHDGRYLSSGDIGGKLYVWDWA
AKKLEKSFKAHAQMLVSHLWHPIEPTKVVTAAWDGHIRSWV
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgttccccacggatcgaccccccacgccagcggacatggcccggctgcaggctttcgga
gccgaaggccgggctgaggcagagctggcgacggacgtgtacctgcattccctcatgaag
cgccgcagcgacagcgtcgcggagcttctcgcgctgtacacgagcccagaggacgctcgc
aaggcgtaccccgacccgccaccctcactgcttcaagtcactgatgacgcatcctcggct
aacacagagaaggcatcggaggcggcaacgggcaccggtagtccgtccagctgcgccatg
gcgcaggcgctaaagagggctcggcgcgagaatgctgcggcggcgctcagcgcatcctcc
tgtgctgccgccgcagcgacagcggccgcccgtcccgtgcccgccgtggacgggccaccg
acggccgtctttgtgaatggcgtggagcgggtcaactacctcggcaagtccttcctagag
ccgccgtcgagcgtgctggagcacgagcagtccacgaagcaaaaggcgtgccagccgccc
cgcaccatgcgcggcgtgttcaaggtaccagaaggctgtgaggcagcgcccaacgccgcc
tccgcgccggcatcgtcttcgttcctggcggaccatggcggtagcagcggcggtgagcga
cgctccggcaaggcgtctggcgtgcagcaactccgctgggccccgcctgcgtacggccac
ctcctcttctctggcgacatcggtgggcagtgccggctgtggaactcgtcgacgcgccag
ctactcgccaccttcgcggcgcattcgcagccaatcaaaagcctggaggtgacgacgaac
gcagcgatcatgtcgactggctcagtagacggcaccgtggccatgtgggacgtcgaggct
ggcgtctgtacgcacgtgctaaccaatccagacagcctccccgtcgtacagcatcttcac
cacccctccgatgaggcgcaccttctgttggcggccgtggacaagaaagtggtcctctac
gacgtgcgcgttggctgcagtaagtaccagcgcgagtacacggggcatatgggcaccatc
ttcaacctcacgctgctgagcaacggtagcaagatgctcaccacctcggaggacaggacg
ctgcgcacttgggactaccgaagtccggtgcagatcaaacagtttgccgatgcggcgatg
cacgctatcacgcacgttctgcaccacccgacgcagccggagttcctcgccgcgcagtcg
ctcaacaacaaggtaatcgtcttccgcgacgacggcggcggccgtctgcgactcctgcac
gactgtgagttcacagggcacaccatttccggcacgcgatgtcagttgagcttcagccac
gatggccggtatctgtcgagcggcgacattggcggcaagctgtacgtatgggactgggca
gcgaagaagctggagaagtccttcaaggcccacgcgcagatgctggtgtcccacctatgg
cacccgatcgagcccaccaaggtggtgacggctgcttgggatggccacatcagaagctgg
gtgtga

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