Leishmania infantum: LINJ_25_1930
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Entry
LINJ_25_1930 CDS
T01112
Name
(RefSeq) conserved hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
lif
Leishmania infantum
Pathway
lif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LINJ_25_1930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lif03041
]
LINJ_25_1930
Spliceosome [BR:
lif03041
]
Complex C
Other components
Step II factors
LINJ_25_1930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_EIPR1
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
5069659
NCBI-ProteinID:
XP_001466224
UniProt:
A4I1N3
LinkDB
All DBs
Position
25:complement(714778..716343)
Genome browser
AA seq
521 aa
AA seq
DB search
MFPTDRPPTPADMARLQAFGAEGRAEAELATDVYLHSLMKRRSDSVAELLALYTSPEDAR
KAYPDPPPSLLQVTDDASSANTEKASEAATGTGSPSSCAMAQALKRARRENAAAALSASS
CAAAAATAAARPVPAVDGPPTAVFVNGVERVNYLGKSFLEPPSSVLEHEQSTKQKACQPP
RTMRGVFKVPEGCEAAPNAASAPASSSFLADHGGSSGGERRSGKASGVQQLRWAPPAYGH
LLFSGDIGGQCRLWNSSTRQLLATFAAHSQPIKSLEVTTNAAIMSTGSVDGTVAMWDVEA
GVCTHVLTNPDSLPVVQHLHHPSDEAHLLLAAVDKKVVLYDVRVGCSKYQREYTGHMGTI
FNLTLLSNGSKMLTTSEDRTLRTWDYRSPVQIKQFADAAMHAITHVLHHPTQPEFLAAQS
LNNKVIVFRDDGGGRLRLLHDCEFTGHTISGTRCQLSFSHDGRYLSSGDIGGKLYVWDWA
AKKLEKSFKAHAQMLVSHLWHPIEPTKVVTAAWDGHIRSWV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgttccccacggatcgaccccccacgccagcggacatggcccggctgcaggctttcgga
gccgaaggccgggctgaggcagagctggcgacggacgtgtacctgcattccctcatgaag
cgccgcagcgacagcgtcgcggagcttctcgcgctgtacacgagcccagaggacgctcgc
aaggcgtaccccgacccgccaccctcactgcttcaagtcactgatgacgcatcctcggct
aacacagagaaggcatcggaggcggcaacgggcaccggtagtccgtccagctgcgccatg
gcgcaggcgctaaagagggctcggcgcgagaatgctgcggcggcgctcagcgcatcctcc
tgtgctgccgccgcagcgacagcggccgcccgtcccgtgcccgccgtggacgggccaccg
acggccgtctttgtgaatggcgtggagcgggtcaactacctcggcaagtccttcctagag
ccgccgtcgagcgtgctggagcacgagcagtccacgaagcaaaaggcgtgccagccgccc
cgcaccatgcgcggcgtgttcaaggtaccagaaggctgtgaggcagcgcccaacgccgcc
tccgcgccggcatcgtcttcgttcctggcggaccatggcggtagcagcggcggtgagcga
cgctccggcaaggcgtctggcgtgcagcaactccgctgggccccgcctgcgtacggccac
ctcctcttctctggcgacatcggtgggcagtgccggctgtggaactcgtcgacgcgccag
ctactcgccaccttcgcggcgcattcgcagccaatcaaaagcctggaggtgacgacgaac
gcagcgatcatgtcgactggctcagtagacggcaccgtggccatgtgggacgtcgaggct
ggcgtctgtacgcacgtgctaaccaatccagacagcctccccgtcgtacagcatcttcac
cacccctccgatgaggcgcaccttctgttggcggccgtggacaagaaagtggtcctctac
gacgtgcgcgttggctgcagtaagtaccagcgcgagtacacggggcatatgggcaccatc
ttcaacctcacgctgctgagcaacggtagcaagatgctcaccacctcggaggacaggacg
ctgcgcacttgggactaccgaagtccggtgcagatcaaacagtttgccgatgcggcgatg
cacgctatcacgcacgttctgcaccacccgacgcagccggagttcctcgccgcgcagtcg
ctcaacaacaaggtaatcgtcttccgcgacgacggcggcggccgtctgcgactcctgcac
gactgtgagttcacagggcacaccatttccggcacgcgatgtcagttgagcttcagccac
gatggccggtatctgtcgagcggcgacattggcggcaagctgtacgtatgggactgggca
gcgaagaagctggagaagtccttcaaggcccacgcgcagatgctggtgtcccacctatgg
cacccgatcgagcccaccaaggtggtgacggctgcttgggatggccacatcagaagctgg
gtgtga
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integrated database retrieval system