Leishmania infantum: LINJ_28_0560
Help
Entry
LINJ_28_0560 CDS
T01112
Name
(RefSeq) RAD50 DNA repair-like protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
lif
Leishmania infantum
Pathway
lif03440
Homologous recombination
lif03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LINJ_28_0560
03450 Non-homologous end-joining
LINJ_28_0560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lif03032
]
LINJ_28_0560
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_28_0560
DNA replication proteins [BR:
lif03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
LINJ_28_0560
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
LINJ_28_0560
BRCA1-C complex
LINJ_28_0560
NHEJ (non-homologous end-joining)
MRX complex
LINJ_28_0560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_21
AAA_15
AAA_29
Rad50_zn_hook
ABC_tran
Arf
Motif
Other DBs
NCBI-GeneID:
5070274
NCBI-ProteinID:
XP_001470089
UniProt:
A4I3C7
LinkDB
All DBs
Position
28:complement(188714..192796)
Genome browser
AA seq
1360 aa
AA seq
DB search
MTSIEKLQLCGVRSFDPNPANQQFIQFQKPLTVILGKNGAGKTTIIEALLNACTGTMPPG
TGTEKGSFVYDPKVVGETEVKAQIRLIFTGKGGKLMQVIRSFQATRSAHRVTFTTLDNTV
AFQDLATGEVISSTYRSSDVDRVVPEMLGVSPAVLEHVIFCHQEESNWPLGPPKDVKRIF
DDIFAATRYVLALDRLRDNSKEFRRQLKEHEASLMALREHREQAKQLEQQIAQKESVVKA
IQGRSIGIEPELRGLRQAREELRTVEEQIETLQREVAVTNGRLEERREAVRRMGVPATSQ
TLDDLLEMRGSFTAQMQQLEEGLVHDTKRYDAATARRRAQEEEMYKCRSNVQLLEREAQL
HKQNVAQLRELIQHLSNEYVLSEGNIDERSLHRLLQKAEDAVAAERQRARAASESVQQHI
RDAEDGVQGGSRVVDGCKKEIEVREHAVENVRRRIKENAAAIAALGGDGCRTKLRQVQVE
VEELQQRVAAAEELRKKGDGEHQSQRILMELEEQNSTVAQLREEMMQQKLLERQQQDLVL
MRQQIDEARAAVAAALQRDVLPILNEVGVQVPQDAAADSFSLTTLTSLRSQAAQIRQLKA
EELRALQARVLELEKVCALHEQKMSYSTDELGQCRRTVDAGTRQCAGLVPDMDVYEEVLL
QAREAAETAAQKRHALEALASCYHDFMVVAKEERTCAVCERPFDSEDALESFLTRKADKQ
RASPEALAAVQAAVNTAQEAYQSLEKLQSVVVTVRQNRHRIPVLEAELDALGDKMKQNRA
EQRGVCAARDAAQHVVHQLDTMYQHLCMACTMGEKTVALRDTLARKEKDFEAAQAEQQPH
ETQRKWGSGDGATARAEPPQRSYEELCEAYAAATERLHKLNRQFTEAQRMERGQAENAAE
RELQDRKTAMFQAEVAVSKLEDLEAAARELQEEAAQHRTRVEELKRQAAEAQHSVEAHQQ
RVLQLRAELQKTDAAERGVLDTAEKQLRELQLSLPPVLSYVQNGCARQLEELRVHLRETE
SAYKAAAQEEEGLASRMKEARKTLSDQHRRSAEIDRHIDILQQEASIAADEAHLAETERT
LASLKSDRLQDVEQLLGEEARHASLATLRELITAKITSLEKIRAQQDGNTEAMLLDVNQL
KQQLRGDKYQNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSYHQEKIAQINQIIA
ELWRQTYRGSDIDTVEIRSETEGTTTTTARRSYNYRVVMKRGNNEMDMRGRCSAGQKVLA
SIIIRLALSEAFCCDCGILALDEPTTNLDDDNARSLADALRTLIQARRAVKHFQLVVITH
DEQFVRALGGQSLEKFYYVHKDREGAFSVIDERTFDQLFA
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcatcgagaagttgcagctctgtggcgtgcgcagcttcgaccccaacccggcg
aatcagcagttcattcagttccagaagccgttgacggtcattctcggcaagaatggtgct
ggcaaaaccaccatcatcgaggcgctgctgaacgcgtgcacggggaccatgcctcccggc
actgggaccgagaagggctcctttgtgtatgatcccaaggttgttggcgaaacagaggtg
aaagcgcagattcgactgatattcaccggcaagggtggtaagctgatgcaggtcatccgc
tcctttcaggccacacgcagcgcgcaccgtgtcacttttacaacactggacaataccgtc
gctttccaggacttggccaccggggaggtgatctcgagcacgtaccgctccagcgatgtc
gaccgtgtcgtgccggagatgctcggcgtgtcgccagctgtgctggagcacgtcattttt
tgtcaccaggaggagtccaactggccactgggaccaccgaaggatgtgaagcgaatcttc
gacgacatcttcgccgcgactcggtacgtcctcgcactggaccggctccgcgataacagc
aaggagtttcgccgccagctgaaagagcacgaggcgagtctgatggcgcttcgagagcac
cgcgagcaagcaaagcagctggagcagcaaatagcgcagaaggaaagcgttgtgaaggcc
attcagggccgcagcatcggcatcgagccagagctacggggcctgcgccaagcgcgtgag
gagctgcgtacggtggaggagcagatcgagacattgcagcgtgaggtggcggtcacgaac
gggcgtctcgaagagcgtcgcgaggcggtgcgccggatgggtgtgccagccacaagccag
acgctagacgatctgctcgagatgcgcggcagcttcaccgcgcagatgcagcagcttgaa
gagggtctcgtgcacgacaccaagcgctacgatgcggccaccgcgcggcgacgcgctcaa
gaggaggagatgtacaagtgccgctcgaacgttcagctgctggagcgtgaggcgcagctg
cacaagcaaaacgtggcgcagcttcgtgagcttatccagcacctgtctaacgagtacgtt
ctgagtgagggcaacatcgacgagcgcagtctgcaccgtcttctccaaaaggcggaggac
gccgtggcggcggagcgtcagcgtgctcgcgctgcctcagagagtgttcagcagcacatt
cgagacgcggaggacggcgtgcagggcggctcccgcgtcgtggatgggtgcaagaaagag
atagaggtgcgcgagcacgccgtggagaatgtgagacgccgcatcaaggagaacgccgct
gccatcgcggcacttggcggggatgggtgccgcacgaagctgcgccaggttcaggtggag
gtggaggagctgcagcagcgtgtcgctgccgccgaagagttgcggaagaaaggtgacggg
gagcaccaaagccagcgcattctcatggagctagaggagcagaatagtaccgtggctcaa
ctgcgtgaggagatgatgcagcagaagctgctggagcgccagcagcaggatctagtgttg
atgcgccagcagatcgatgaagccagggcggccgtggcggcggcgctgcagcgagacgtg
ctcccgattttgaacgaagttggcgtacaagttccgcaggatgcggctgccgactctttt
tcattgacaaccttaacgtctttgcgctcccaagctgcccagatacggcagctgaaggcg
gaggagttgcgtgctctccaggcgcgtgtgctagagctggagaaggtgtgcgcgctgcac
gagcagaagatgtcctacagcaccgatgagctgggccagtgtcgccgcactgtggatgcc
ggcactagacagtgcgccggcctcgtcccggacatggacgtctacgaggaggtgctgctg
caggctagggaggcggcggagacggcggcgcagaaacgccacgccctggaggccctcgcg
tcgtgctaccacgatttcatggttgtggcgaaggaggagaggacgtgtgccgtctgcgag
cgtccctttgacagcgaagatgcactggagagctttctgacgcgaaaagcggacaagcag
cgcgccagcccagaggcactagcggctgtgcaggcggccgtcaacacagcccaggaggcg
tatcagagtcttgaaaagctgcagagcgtcgtggtgacagtgcgacagaacaggcatcgt
attccggttctagaggccgagctcgacgcgctgggggataagatgaagcagaaccgcgca
gagcagcgcggggtctgcgcggcccgcgatgctgcccagcatgtggtgcatcagctggac
accatgtaccagcatctgtgcatggcatgcaccatgggagagaagacggtagcgctgcgc
gatactctggcaaggaaggagaaagactttgaggcggcgcaggcggagcagcaaccacac
gagacacagcgaaagtggggcagcggcgatggtgccacagcgagagctgaaccaccgcag
cgctcttatgaggagctgtgtgaggcctacgcggctgcgacggagcgattgcacaagctc
aacaggcagttcactgaggcccagcggatggagcgcggccaggctgagaatgcggcagag
cgggagctgcaggatcgcaagacagcgatgttccaggctgaggtcgcggtttcaaagctg
gaggacttggaggcggccgctcgtgaactacaggaggaggctgctcagcaccgcacgcgg
gtggaggagctgaagcgccaggcagcagaggcgcagcactccgtggaggcccatcagcaa
cgcgttctgcaactccgtgccgagcttcagaagacggacgctgccgagcgtggtgttttg
gacacagcagagaagcagcttcgcgagctgcagctgtcgctgcctccggtcctcagctac
gtgcagaacggctgcgccagacagctggaggagcttcgggtgcacctgcgcgagactgag
agcgcgtacaaagccgcggctcaggaggaggaggggcttgccagccggatgaaggaagcg
cggaagacacttagcgaccagcaccgccgctctgctgagatcgaccgccacatcgacatc
ctgcagcaggaggcgtccattgcggccgacgaggcgcacttggcggagacagagcgcacc
ctcgcctccctgaagtcggaccggctgcaagacgtggaacagctgctgggggaggaggca
agacatgcaagcctggccacactgcgcgagctgatcaccgccaagattacgtcgctggag
aagatacgtgcgcagcaggatggcaacacggaggcgatgctgctcgatgtaaatcagctg
aaacagcagctgcgtggcgacaagtatcagaacatcgagaagcgctaccggtccacgttc
ctgaaggtgcaaacaacggagatatccatccaggacattgagaagtactacagtgcgctg
gagaaggcggtgcagtcgtaccaccaggagaaaattgcacagatcaaccaaatcatcgcg
gagctgtggcgccagacgtaccgcggcagcgacatcgacacggtggagattcgctcagag
acggagggcacgacgacgactacggcgcggcgcagctacaactaccgcgttgtcatgaag
cggggcaacaacgagatggacatgcgtggtcgctgcagtgctggacagaaggtgctcgcc
tccatcatcattcggctcgcgctgagcgaagccttctgctgcgactgcggcatcctcgcc
cttgatgagccgacaacaaacctcgacgacgacaacgctcgcagcctggcggacgcgctg
cgcaccctcatccaggcgcggagggcggtgaagcactttcagctcgtcgttatcacgcac
gacgagcagtttgtgcgtgcgctgggagggcagtcgctggagaagttctactacgtccat
aaggatcgagagggcgccttctcggtgattgatgaacgcacctttgaccagctttttgcg
tga
DBGET
integrated database retrieval system
