Leishmania infantum: LINJ_28_1940
Help
Entry
LINJ_28_1940 CDS
T01112
Symbol
RPA1
Name
(RefSeq) putative replication factor A, 51kDa subunit
KO
K07466
replication factor A1
Organism
lif
Leishmania infantum
Pathway
lif03030
DNA replication
lif03420
Nucleotide excision repair
lif03430
Mismatch repair
lif03440
Homologous recombination
lif03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LINJ_28_1940 (RPA1)
03420 Nucleotide excision repair
LINJ_28_1940 (RPA1)
03430 Mismatch repair
LINJ_28_1940 (RPA1)
03440 Homologous recombination
LINJ_28_1940 (RPA1)
03460 Fanconi anemia pathway
LINJ_28_1940 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lif03000
]
LINJ_28_1940 (RPA1)
03032 DNA replication proteins [BR:
lif03032
]
LINJ_28_1940 (RPA1)
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_28_1940 (RPA1)
Transcription factors [BR:
lif03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
LINJ_28_1940 (RPA1)
DNA replication proteins [BR:
lif03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
LINJ_28_1940 (RPA1)
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
LINJ_28_1940 (RPA1)
MMR (mismatch excision repair)
LINJ_28_1940 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
LINJ_28_1940 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
Zn_ribbon_TiaS
Zn_ribbon_15
Zn_ribbon_6
tRNA_anti_2
DZR
Motif
Other DBs
NCBI-GeneID:
5070408
NCBI-ProteinID:
XP_001470220
UniProt:
A4I3Q8
LinkDB
All DBs
Position
28:complement(716528..717931)
Genome browser
AA seq
467 aa
AA seq
DB search
MQQPGSHQIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLIDESAAIR
ATVFNDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTS
TAALPMQRYNFVPIELLKQREVGSLVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDM
TAAVEVTFWNDEAKAWCYPVGTVVALRQLKVGSFDGVTLSSTYQTKIDINPTDLPDVKKL
ATWYVTTGGANVTSLSSQGLGAASGAGGESDRGRKYLDEIQSEGIGRGLKPEYVDVRCVP
IYFKQDAQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQRYLVSIQVTDNVSQAWL
TLFNEAGIEFFGMEAAELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEETSSNAMTGEE
SDRLRMSVVRISEFMPIAGTSEETRRRLAQNLRTECDEILRLIEAYV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgggcagccaccagatccagcccatcgactccctcacaccgtttctcggt
ggcaagtggtggattcgggcccgtgtgacagacaagacggacatccgtacctggaacaag
ccgacgtcgcagggaaagctcttctccttcaccctcattgacgagtctgccgcgattcgg
gcaacggtcttcaacgacgccgtcgacaccttcgagccgctcatcgtcaatggacaggta
tactatttcagcggtggccaggtgaagaatgcgaaccggcgtttcagcaacgtgaacaat
gactacgagctcacgtttgaccgcagctcggagattatgctggcgcggcaggacacatca
acagcggcgctgccgatgcagcgctacaactttgtgccgatcgagcttctgaagcagcgc
gaggtcggttcgctcgtcgacgtgcttggcgtcgtgctcaaggtggacgaagtgtcgtcc
atcacgcagaagtcgacgggccgtgagctggtgaagcgaaacgtcaagatgggcgacatg
acggcggctgtggaggtcaccttctggaacgatgaggcaaaggcgtggtgctacccagtc
ggcaccgttgtggcgctgcggcagctgaaggttggcagtttcgacggtgtgaccctctca
tccacttatcagaccaagatcgacatcaaccccacagacctgccggacgtcaagaagctc
gcgacgtggtatgtgacgactggcggcgctaacgtgacgtctttgtcgtcgcaggggctt
ggcgccgcgagcggggccggtggcgagagcgaccgcggccgcaagtacctggacgagatc
cagtcggaggggatcggacggggcctgaagcccgagtacgtcgacgtccggtgcgttccg
atttacttcaagcaggatgcccagtggtacgacgcgtgcccgacctgcaacaagaaggtg
accgaggagggcgcgcagggtgaccgctttcgctgcgaaaagtgcgacaagaccgtcacg
ccgacgcagcgctacctcgtttccatccaggtcacggacaacgtctctcaggcgtggcta
acgctcttcaacgaagccggcatcgagttctttgggatggaggcggcagaactgaagcgt
cgtgcgcaggaggaccctctctacatcgcgaagctggcgcagggccgcatgaaccgacca
gtggtgatgcgtctgcgcgtgaaggaggagacgagctcgaacgccatgaccggtgaggag
tcagaccggctgcgcatgtcagtggtgcgcatctccgagtttatgccgattgcgggcacc
tccgaggagacgcgccgccgcctcgcgcagaacctgcgcacagagtgcgatgaaattctc
cgcctcatcgaggcttacgtctga
DBGET
integrated database retrieval system
