Leishmania infantum: LINJ_28_2220
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Entry
LINJ_28_2220 CDS
T01112
Name
(RefSeq) putative mitochondrial DEAD box protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lif
Leishmania infantum
Pathway
lif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LINJ_28_2220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lif03041
]
LINJ_28_2220
03009 Ribosome biogenesis [BR:
lif03009
]
LINJ_28_2220
Enzymes [BR:
lif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LINJ_28_2220
Spliceosome [BR:
lif03041
]
Complex A
U1 snRNP components
U1 related factors
LINJ_28_2220
Complex B
LINJ_28_2220
Ribosome biogenesis [BR:
lif03009
]
Eukaryotic type
Pre-60S particles
Helicases
LINJ_28_2220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
5070436
NCBI-ProteinID:
XP_001470248
UniProt:
A4I3T6
LinkDB
All DBs
Position
28:complement(829369..831003)
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AA seq
544 aa
AA seq
DB search
MQRFASALLGRWGAAQCRVVPFRAHPTLLPLMNRVRCFSVISAAYEGSAPATSSNIGDPH
APPKTNASAVSTEHDVSITDGNGDRVDVTPLNSFEELRDAPRWLAEGLKTLKYPSTTDIQ
KFTIPLLADGHDVIGLAPTGSGKTVAFAVPALAGFKPNPDGTPSVLVLAPTRELVQQTTK
VFQNLGCGQVRVCEAYGGAPRDLQARRLRNGCDALVACPGRLKDFLDGGDVSIRNLSFLV
FDEADRLLDMGFQVHLDEIMAYLGSASHPQTMMWSATWPESVQEMARKYLSDDRVLIRAG
TAGAGLQVNEHIKQELIFCRTFTERIEKLGSLVEDGTIDDNKDKLIIFVERQADTENTAR
AFSHRLGIDTRYVGTIHGGLSQRQRDRVMSMFKNNHIRLLVATDVASRGLDIPDVTCVVN
FQAPKTIDSYCHRIGRTGRAGRTGTAYTFLGEEDGGLATELVNYLTRCHATAPKELMQLA
ESYQHRMQQQRQRFRRVDRGGFSRRENNSGFGRRRSDRGGSREFMPRRPDSRKPDDDLPS
TLDW
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttttgcaagtgctttgttgggcagatggggtgccgcacagtgcagggtggtg
ccttttcgggctcacccgactcttttgcccctgatgaacagggtgcgctgcttctctgtg
attagtgctgcttacgagggatcggcccccgcaacgagctcgaatatcggcgacccgcat
gcgccaccgaagacaaacgcgtctgcagtgtcaacagagcacgacgtctctatcacggac
ggcaatggtgatcgtgtcgacgtcaccccgctaaactcatttgaagagttgcgcgatgca
ccgcgatggctggcggaggggttgaagacgctcaagtacccttccacgactgacattcag
aagttcacaatacctttgctggccgacggtcacgatgttatcggacttgcaccaacaggc
tcgggaaagacggtggcgttcgcggttccagccctggcggggttcaagcccaaccccgat
gggacgccgtctgttctggttctagctcccacgcgggagttggtgcaacaaaccacgaag
gtatttcagaacctcggatgtgggcaggtgcgcgtctgcgaggcctacggtggtgccccg
cgcgatctacaggcccgccgtcttcgcaacggctgtgacgctctcgttgcttgtccagga
cgactcaaggactttctcgacggcggcgacgtgtccatccgtaatctgtcgtttctggtc
tttgacgaagcagatcgccttctcgacatggggttccaggttcacttggatgagattatg
gcctaccttggctcagcttcacacccgcagacgatgatgtggtcggcgacgtggccagag
tcggtgcaagagatggcgcgcaaatatctatcggacgatcgtgttttgattcgagccggt
acggccggcgcggggcttcaagtgaatgagcacatcaagcaagagctcatcttctgcaga
accttcacagagcgcattgagaagcttgggtcgttggtcgaggatgggaccatcgacgac
aacaaggacaagctcatcatctttgtggagcgccaggcggatacggaaaacacagccagg
gctttcagccaccggctaggaatcgatacacgctacgtagggacaattcacggcggtctg
tcgcagcggcagcgggacagggtcatgagcatgttcaagaacaaccacattcgccttctc
gtcgcgaccgatgttgcttctcgaggtctagacattcctgatgtaacgtgcgtggtgaac
tttcaggctccaaaaacgattgacagctattgccatcgcatcggccgcaccggccgcgcc
ggtcgcaccggcaccgcttacacattccttggcgaagaggatggtggtctcgcaacagaa
ctcgtcaactacttgactcgctgccatgccactgccccaaaggagttgatgcagctcgcc
gagagctaccagcatcggatgcagcagcagaggcagcgcttcaggcgggttgatcgagga
ggtttctccagaagggagaacaacagtgggttcggccgccgccgcagcgatcgaggcggt
tcacgcgagttcatgcctcgcaggcccgactcgcgcaagcccgatgacgatcttccgtcc
acattggactggtga
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