KEGG   Leishmania infantum: LINJ_28_2780
Entry
LINJ_28_2780      CDS       T01112                                 
Name
(RefSeq) putative splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
lif  Leishmania infantum
Pathway
lif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LINJ_28_2780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lif03041]
    LINJ_28_2780
   03036 Chromosome and associated proteins [BR:lif03036]
    LINJ_28_2780
Spliceosome [BR:lif03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    LINJ_28_2780
 Complex B
    LINJ_28_2780
 Complex C
   U2 SnRNP specific factors
    LINJ_28_2780
Chromosome and associated proteins [BR:lif03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    LINJ_28_2780
SSDB
Motif
Pfam: TOR1L1_N SF3b1 HEAT_2 UME PPP2R1A-like_HEAT RRP12_HEAT TRI4_N CTD Phage_head_chap DHO_dh
Other DBs
NCBI-GeneID: 5070491
NCBI-ProteinID: XP_001470303
UniProt: A4I3Z1
LinkDB
Position
28:1013867..1016947
AA seq 1026 aa
MGSSGVTAGGGTPLFASGSTPRMGGVTPMFTGATPAAGATFGATPNYQYEGGTPLQSHFA
SSVETQSITTAAIEAKAKALEKEWNRKNKRLTSEYLDSILPREFFTVAAVPADYNPLPPE
EPNFYEIAVRTMDVFSMQAGAAAAVTAGLDANGQPIKYDIPEDMGDGMPTMKVEDAAVFV
ELLKYHKAEKIPDEHLPSYLLMKNLFKIKNGDTMQRRAGTRYLLDKATIFGSHFIFQRLS
YIWSSDILNIEEKHHFIDFIKSLLQQMGKGARQFTKEVIHLVEPLLTAHERILRDDGKQV
LTLLTRVVGFQAVFAVIREDFGHAESIVRRHTARVMAVVGYAAGTEEVTAALRDMSYAPS
ALARQTVVRSMAELAKMVGHALIAALPEMVAMLERLLRDEKRVQRDAALAVAAIAEATAP
DGIEELAPLVDVICEECMKGIGSMASPFIQAFGALVPLMSPYDAQARTAAMMPNLVNQFS
TPEDEFRRVLISVVRKCVLAEGVTPQFIRQTILEPFFEGFWRVRRLAAERQTSGSLVATT
VEIAKKLGSVDVLVKLSPDMKDESEEYQRMVLTAIKKVVDATGMDAAPDTLVTFVLDGAI
AAVRQDELGTSKLVMNVLATICNALAARLRPYLKQVFDLIKRRRENREASMRAQTADLVS
RIAHTVMLADGAVFLQDLGLSLYERLEDPDARALSANLRAVRSILGELGSRRFKPSVREL
LKRLTFVIKSRNSHVQNGAIALIEDIATNYDTDVDAIHLHQLATRGLFELLDSPQRATRH
ACARTFGVIAKKIRPFAIILELVDNFRQDKRQIRICTAVALSAIAKECGPFTIIPYLLNE
YKISEGKQVAVIVQHSVLKAIRYIFEAIGSIGKEYVYPMIPLLERALTETNIQMRRMAVE
ACRAILLSVAGNDGFEDIALHLLNFVHPNIVELLAKNEVKIGEERLKMVTAVVSYYEAAR
VVIEPGKLLQYLLQGLFHPARKVRDIYRRTYNLIYVGSPERLVPYYPRIENDASHTYVRH
ELEVLL
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgggcagcagcggcgtcacagctggcggcggcacgcccctcttcgccagcggcagtacc
ccgcgcatgggcggggtcacccctatgttcaccggcgcgaccccggccgccggggcaacc
ttcggcgccaccccgaactaccagtacgagggcgggacaccgctgcagtcgcacttcgcc
tcctccgtcgagacgcagtccatcacgacggcggccatcgaagccaaggcgaaggcgttg
gagaaggagtggaaccgcaagaacaagcggctcacaagcgagtacctggacagcatcttg
cccagagagttcttcacggtggcggcggtgccagctgactacaacccgctgccgccggag
gaaccgaacttctacgaaatcgccgtgcgcaccatggacgtgttttcgatgcaggccggc
gcagcggcggcagtgacggccggcctggacgcgaacgggcagcccatcaagtacgacatc
ccggaggacatgggtgacggcatgcccaccatgaaggtcgaggacgccgccgtgttcgtc
gagctgctcaagtaccacaaggcagagaagatccctgatgagcatctgccttcctacctc
cttatgaagaacctcttcaagatcaagaacggcgacacgatgcagcgtcgcgccggcacg
cgctacctcctcgacaaggcaacgatctttggcagccactttatcttccagcgcctcagc
tacatctggagctcggatatcctcaacattgaggagaagcaccacttcatcgacttcatc
aagtcgctgctgcagcagatgggcaaaggcgctcggcagttcaccaaggaggtgattcac
ctggtggagccgctgcttacggcgcacgagcgcattctgcgggacgatggcaagcaggtg
ctcaccttgctgacacgggttgtggggtttcaggcggtgtttgcggtgattcgcgaggac
tttggccacgccgagagcattgtgcgtcgtcacacggctcgtgtcatggcagtggtcggg
tatgcggccggcaccgaggaagtgacggcggcgctgcgtgacatgtcctacgccccgtcg
gcgcttgctcgccagacggtcgtgcgctcgatggcggagctggcgaagatggtggggcac
gcgttgatagcggcgctgccggagatggtggcaatgctggagcgtctgctgcgcgacgag
aagcgcgtgcagcgggatgcggccctggcggtggcggcgattgccgaggcgacggcgccg
gacggcattgaggagctggcaccgctggtcgacgtcatctgcgaggagtgcatgaagggg
atcggcagcatggcgtcgcccttcatccaagccttcggtgccttggttccgcttatgtcc
ccctacgacgcgcaggctcgcacggcggcgatgatgcccaatctcgtcaaccagttcagc
acaccggaggacgagttccgccgcgttctcatatctgtcgtgcgcaagtgcgtgttggcg
gagggcgtgacgccgcagttcattcggcagacaatcctagagccgttctttgagggcttc
tggcgtgtgcgtcgccttgccgcggagcgccaaacatcaggaagtcttgtagcgacgacg
gtggagattgcgaagaagctgggaagcgttgatgtgctcgtgaagttatcaccagacatg
aaggacgagagcgaggagtaccagcgcatggtgctgacggccatcaagaaggtcgtggac
gccaccggcatggatgcggcccccgacacgctcgtcaccttcgtcctcgacggcgccata
gccgccgtgcgccaggatgagctcggcacgagcaagttggtcatgaatgtgcttgcgact
atctgcaacgcactggcggcgcggttgcggccgtacctgaagcaggtgttcgacctcatc
aagcggcgccgcgagaatcgcgaggcttcgatgcgagcgcagacggccgacctcgtctcg
cgcattgctcacaccgtcatgctggcggacggcgccgtgttcctgcaggacctggggctg
agcctgtacgagcggctcgaggacccggatgcgcgggcgctgagcgcgaacttgcgcgcg
gtacgctccatcttaggcgagctgggctcccgccgcttcaagccctcggtgcgcgagctt
ctgaagcggctcaccttcgtcatcaagagccgcaacagccacgtgcagaacggcgccatt
gccctgatcgaggacattgcgaccaactacgacacggatgtcgacgcgattcacctgcac
cagctggcgacccgtggactcttcgagctgctcgactccccgcagcgggcgacgcgacac
gcgtgcgcgcgcacctttggcgtcatcgccaagaaaattcgccccttcgccatcatcctc
gagctggtcgacaactttcgccaagacaagcggcagattcgcatctgcacggccgtggcc
ctgagcgccatcgcgaaggagtgcggccccttcaccatcattccctacctcctgaacgag
tacaagatcagcgaggggaagcaggtggcggtcattgtgcagcactcggtgctcaaggcg
atccggtatattttcgaggccatcggttcgatcggcaaggagtacgtctatccaatgatc
ccgctgctggagcgcgccttgacggagacgaacatacagatgcgacgcatggccgtggag
gcctgccgcgccattctgctctccgtggccggcaacgacggctttgaggacatcgcgctg
cacctgctgaattttgtccacccgaacattgtggagctgctggctaagaatgaggtcaag
atcggcgaggagcgcctcaagatggtgacggccgtcgtgagctactacgaggcggcgcgg
gtggtgatcgagccggggaagctgctgcagtacctcttgcagggcctgttccacccagcg
cgcaaggtgcgcgacatctaccggcgaacttacaacctgatctacgtcggcagcccagag
cgcctcgtcccgtactacccacgcattgagaacgacgcctcacatacgtacgtgcgccat
gagctggaagtgcttctctaa

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