Leishmania infantum: LINJ_29_0670
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Entry
LINJ_29_0670 CDS
T01112
Name
(RefSeq) conserved hypothetical protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
lif
Leishmania infantum
Pathway
lif03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LINJ_29_0670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_29_0670
Enzymes [BR:
lif01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
LINJ_29_0670
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
LINJ_29_0670
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
LINJ_29_0670
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
LINJ_29_0670
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
LINJ_29_0670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
HIT
zf-C2HE
Zn_SUZ12
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
5070618
NCBI-ProteinID:
XP_001466586
UniProt:
A4I4B7
LinkDB
All DBs
Position
29:complement(243655..244449)
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AA seq
264 aa
AA seq
DB search
MQASPVLAGAAVRRTAAASVGSEPRTRLPFLINVVKKAQKSANTVVAPTPALSSTLSTTE
PPIQAAAFKPYPLLSPGETKQAAGSSLLYKDDVCVLVNDAFPKSMVHCLVMPLDLRLQSL
NALTKKDIPLLRHMLHVGDEYVRYLKTAVPHTYTARRFIAGFHALPSLPMLHLHVLSTDL
DSPCLKNKKHYNSFATFFFLTGYRVLEDLEQHGRVTLNQDVTRLRQMEEQDMKCLWCGTA
LPSVPAMKSHIQSCPQNKAVEKSS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctcaccggtgctggccggcgcggcggtgcgccgaacggcggcggcctccgtc
ggcagcgaacctcgcaccaggttaccctttctcatcaacgttgtcaagaaggcgcagaag
tctgccaacacggtggttgcgccgacgccggcactctcctcgacgttgtcgacgacggag
ccgcctatccaagccgccgccttcaagccatacccgcttctgagccctggcgagaccaag
caggccgccggcagctccctcctctacaaggacgacgtctgcgtgcttgtgaacgatgca
ttccccaaatcgatggttcactgcctggtcatgccactggacctccgcctacagtccctc
aacgccctcaccaagaaggacatcccactgctgcgccacatgctgcacgtgggggatgag
tacgttcgctacttaaagacggcggttccccacacctacacggcgcgccggtttattgcg
ggattccacgcgcttccctcgttgcccatgctgcacctgcacgtgctgtctacggatctg
gacagtccttgtctcaagaacaagaagcactacaacagcttcgccaccttcttcttcctc
acgggctaccgcgtcttggaagacctggagcagcacggccgcgtgacgctgaaccaggat
gtcactcgccttcgacagatggaggagcaggacatgaagtgcctgtggtgcggcaccgca
ctgccgagcgtgcccgctatgaagtctcacatccagagctgcccgcagaacaaagccgtg
gagaaatcgtcgtag
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