KEGG   Leishmania infantum: LINJ_30_0340
Entry
LINJ_30_0340      CDS       T01112                                 
Name
(RefSeq) putative KU80 protein
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
lif  Leishmania infantum
Pathway
lif03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    LINJ_30_0340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lif03400]
    LINJ_30_0340
DNA repair and recombination proteins [BR:lif03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     LINJ_30_0340
SSDB
Motif
Pfam: Ku Ku_PK_bind Ku_N
Other DBs
NCBI-GeneID: 5070922
NCBI-ProteinID: XP_001466880
UniProt: A4I561
LinkDB
Position
30:complement(107459..109855)
AA seq 798 aa
MSKGAAVLVLDITLPRAAALAEACDLCDRILADKMIYAPSDEVAVILAGTEKSRSALYER
SEQARYNHITVAADLGPATTLTLAPIAATRAGVAVLPDGATVRQSIAEAYDFIDALQVAV
AVLQVRTSQKRYNRCIYFLTDARHEVRHKEDLLSLIGALQRDQVALVVIGFDFQALPAPT
DSQGKFNEFTAGEASAWAALDRKAQNEIILAALCAELGSPSTLVSPAEALASLSLPRCRR
IRQQPVLKVALRIGDVRLATQLFTLTQEERLPSLRRSTQEGVDVVQTIEYVAVGGVEEQP
CALAKEERVEAFFLGADRISCSEADRETMRVKGPRALEAIGFVGEAEVEPYLLMGGTRAL
LPLAGDHAGQRGFNALVDAMASSRKAMLVRLVRTADAAPSLCVCFARTAGSSAEQRHLVL
APLPFAEDVRALRFSEYPELQFSAAEEQLMDELIDGLSVDDSVLAPHDTFNPVLQQYYAT
LRSKLSAMNVSAEKGNAKATSSEAAVPQLLPTLRGTSTDFFAEGSAVYEAVSAHRAALAS
CASAFPYEDEVDALLPGSRDAGWKGKPWYQDVATTSSLIDPQAVSPPSASQGSGGAPSTI
AAAIARGVRCGGEADEASAGSHATSDANSISTAPHDTISGGLSFAITSVDPVGSFSMIVH
HPAVTEAQLNKAKDDLSDVIWELLRSSIKDAIYRKCMACIMALRQFCVKQDDAAYYNDFL
LKLEVVARQCGRDTDFWAPYVVERKDSANVWPITAQECKSAALPDDTAAKAFLQKDRFDP
AIAFDDTTDDDDWLAEIQ
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgtccaagggtgccgctgtgctggtgctggacatcactctcccccgcgctgcggcgctg
gcggaggcgtgtgacctgtgcgacagaatcctcgcggacaagatgatatacgcgccatcg
gacgaggtggctgtcattctagccggcactgagaagtctcgcagcgctctgtacgaacgg
tctgagcaggcgcgctacaaccacatcactgtggctgccgatctcggaccggcaacgacg
ctgaccctcgcacccattgctgctactcgcgccggtgttgctgtgctgcctgacggcgcg
actgtgcggcaatctatcgcggaggcgtacgacttcatcgacgcccttcaggtggcggtg
gcggtgctgcaagtgcgcacgagccaaaagcggtacaatcgctgcatttacttcctcacc
gacgcccgccacgaggtgcggcacaaggaggatctgctttccctcatcggtgccttgcag
cgcgaccaggtggcgttggtggtgatcgggtttgattttcaggcactgccagcacccacg
gattcacaggggaagttcaacgaattcaccgcaggtgaagctagtgcgtgggctgcgctc
gataggaaggcacaaaacgagataatactcgcggcgctgtgcgccgagctggggtcgccg
agcacactcgtcagccccgcagaggcgctggcgagtctctcgttgccgcgctgtcgaagg
atccgccagcagcccgtgctcaaggttgcgcttcgcattggtgacgtgcggcttgccacg
cagctgttcactctcacgcaggaagagcggctgccctcgctgcggcggagcacccaggaa
ggcgtagacgtggtgcagaccatcgagtacgtcgccgtcggcggcgtggaagagcagccg
tgtgccttggcgaaggaggagcgggtggaggcgttcttcttgggcgccgaccgcatctca
tgcagcgaggccgatcgagaaacgatgagagtaaagggcccgcgcgcgctggaagcgatc
gggttcgttggagaggccgaggtggagccgtacctgttgatgggcggcacacgcgcgctg
ctgccactggcgggcgaccatgccggacagcgcggcttcaacgccttggtggacgcgatg
gcatccagtcgtaaggcgatgctggtgcggctcgtgcgcacggcagatgctgctccgtcg
ttatgcgtatgctttgcgcggacagcggggtcgtctgcggagcagcgccacttggtgctg
gctcctctcccgttcgccgaggacgtgcgagcccttcgcttctccgagtacccggagctg
cagtttagtgcggccgaggagcagttgatggacgagctgatcgacggcctctctgtggat
gactcggtgctggcgcctcacgacaccttcaacccggtcctgcaacagtactacgccact
ctgcgatccaagctgtccgccatgaatgtctcggcggagaagggcaacgcgaaggcgacc
tcgtccgaagcagcggtaccacaactgctgcccacgttgaggggtacctccaccgacttc
ttcgcagagggcagcgcggtgtatgaggcggtatcggcgcaccgggccgctcttgcgtct
tgcgcaagcgcgttcccgtacgaagatgaagtggacgcgctcttgccaggaagcagagac
gcgggttggaagggaaagccatggtaccaagacgtggcgacgacgtcatcactgatagac
cctcaggccgtatcgccgccttcagcatcccagggatctggtggagccccgtccacaatc
gccgctgccattgctagaggcgtgaggtgcggcggggaggcggacgaagcgtctgccggc
agccatgccacgtcggatgcgaacagcatctccaccgctccacacgacaccatcagcggc
ggtctctccttcgcgatcacgtccgttgacccagtgggtagtttctccatgattgtgcac
caccctgcagtgacggaggcacaactgaacaaggcgaaggacgacctcagcgatgtcatc
tgggagctcctgcgcagcagcataaaggacgccatctaccgcaagtgtatggcctgcatt
atggccctccgccagttctgcgtgaagcaggacgacgccgcctactacaacgatttcctg
ctcaaattggaggtggttgcacggcagtgcggccgcgacaccgatttctgggccccatac
gtggtggagcggaaggacagcgccaacgtgtggcctatcacagcacaggagtgcaagtct
gcagccctgcccgacgataccgccgcgaaggctttcctgcagaaggaccgcttcgacccc
gccatcgccttcgacgacacgactgacgatgatgactggctggcagaaattcagtag

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