Leishmania infantum: LINJ_30_0560
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Entry
LINJ_30_0560 CDS
T01112
Name
(RefSeq) putative nuclear cap binding protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
lif
Leishmania infantum
Pathway
lif03013
Nucleocytoplasmic transport
lif03015
mRNA surveillance pathway
lif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LINJ_30_0560
09122 Translation
03013 Nucleocytoplasmic transport
LINJ_30_0560
03015 mRNA surveillance pathway
LINJ_30_0560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_30_0560
03041 Spliceosome [BR:
lif03041
]
LINJ_30_0560
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
LINJ_30_0560
Spliceosome [BR:
lif03041
]
Common components
Common spliceosomal components
Cap binding complex
LINJ_30_0560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
5070943
NCBI-ProteinID:
XP_001466901
UniProt:
A4I582
LinkDB
All DBs
Position
30:complement(176990..177556)
Genome browser
AA seq
188 aa
AA seq
DB search
MSSDLVDTVPRMEYVDRHELLRSLLTTEEFRERRQEQLNYSATVYVGNLSFYTTEEQVYN
HFSPCGHIRDIVMGLNEATRCPCGFCFVVFESQAAAVLAVHGLDGSLLDDRVVSVSWDVG
CDGSRRWGRGAHGGQVVDGVRQNLDEGRGGLGALRRDALGVPASTAEDELVAYDWVEAPP
KRRGAHTK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgatttggtggacacggtccctcgaatggagtatgtggatcgccacgagttg
ctccggtctctcttgacaacggaggagttccgggagcggcggcaggagcagctcaactac
agcgccaccgtctacgtgggcaacttgtccttctacacgacggaagagcaggtgtacaat
cacttcagtccttgtggacacatccgcgatatcgtgatgggcctcaacgaggcgacacgc
tgtccatgcgggttctgctttgtcgtgttcgagtcacaggcggccgcggtactggcggtg
cacggactcgacgggtcactgctggacgaccgcgtcgtgtccgttagctgggatgtgggc
tgcgacgggagtcgccgctggggccgtggcgctcacggcggccaagtggtagacggcgtt
cgccaaaacctcgacgagggccgcggtggcttgggtgccctgcggcgcgacgcgctgggc
gtgcctgcctcgaccgcggaggacgagctggtcgcctacgattgggtagaggctccaccg
aagcgcagaggtgcccacacaaagtag
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integrated database retrieval system
