Leishmania infantum: LINJ_30_2620
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Entry
LINJ_30_2620 CDS
T01112
Name
(RefSeq) putative replication factor C, subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
lif
Leishmania infantum
Pathway
lif03030
DNA replication
lif03410
Base excision repair
lif03420
Nucleotide excision repair
lif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LINJ_30_2620
03410 Base excision repair
LINJ_30_2620
03420 Nucleotide excision repair
LINJ_30_2620
03430 Mismatch repair
LINJ_30_2620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lif03032
]
LINJ_30_2620
03036 Chromosome and associated proteins [BR:
lif03036
]
LINJ_30_2620
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_30_2620
DNA replication proteins [BR:
lif03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LINJ_30_2620
DNA Replication Termination Factors
ELG1-RFC complex
LINJ_30_2620
Chromosome and associated proteins [BR:
lif03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
LINJ_30_2620
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LINJ_30_2620
Check point factors
HRAD17(Rad24)-RFC complex
LINJ_30_2620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_11
AAA_22
RuvB_N
Rad17
SLFN-g3_helicase
AAA_16
AAA_28
AAA_30
ResIII
AAA_5
Mg_chelatase
DUF815
AAA_19
Viral_helicase1
AAA_33
AAA_2
AAA_24
ATPase_2
AAA_7
Motif
Other DBs
NCBI-GeneID:
5071154
NCBI-ProteinID:
XP_001467108
UniProt:
A4I5T9
LinkDB
All DBs
Position
30:complement(982273..983337)
Genome browser
AA seq
354 aa
AA seq
DB search
MSSSSQPAQKRAKTEGASDTAGAAAPWVEKYRPRTLAEVEAQDEAVGALRACLKEGANMP
HFLFHGPPGTGKTTSILAVAHELFGPDYIRSRVRELNASDDRGINVVREKVKIFAQGAVS
SSGSSVTQSDGKVYPVPPFKLIILDEADALLPDAQAALRRMMEDFSDVTRFCILCNYVSR
IIDPIASRCAKYRFKPLVKSALYHRIEYVAQAEGITLSPASLHALDTVSGGDLRLAIMHL
QSAQKAKGDDLSKEDFVSVSGSVPADVMQRYLSALFSHRLEEVIQASRRLVAEGFAAAQV
LLQMQHYLVSAECPLNSAQRGKIMLKLCQTERRLADGGDDYLQLLDIGSAVCSA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgtcgtcacaacctgcgcagaagagggccaagacggagggcgcgtccgacacc
gccggcgctgccgcgccgtgggtggagaagtatcggccacgcacattggcagaggtggag
gcgcaggatgaggccgttggcgccctccgcgcgtgcttgaaggagggggccaacatgcct
cactttctctttcacggcccacctggcacgggcaagacgacgtccatcctcgccgtggcg
cacgagctcttcggccccgactacatccgaagtcgggtgcgcgagctaaacgcctctgac
gaccgtggcatcaacgtggtccgggagaaggtgaaaatctttgcgcaaggcgctgtctcg
agcagcggtagcagcgtcacccagtcggatggaaaagtctacccggttccacctttcaag
ctcatcattctcgacgaggccgacgcactgctccccgatgctcaggctgctctgcggcgc
atgatggaggactttagcgatgtgacccgcttttgcatcctctgcaactacgtaagccgc
atcatcgatccaatcgcgagccgatgcgccaagtatcgcttcaaaccgcttgtaaagagt
gccctctatcaccgtatcgagtacgtggcccaagccgagggcatcaccctctcaccagcc
tctctccacgccttggacaccgtgagtggcggcgatctccgtctcgccattatgcacctc
cagtcggcacaaaaggcgaagggggacgacttgtcgaaggaggacttcgtctccgtatct
ggcagcgtgccggcggacgtgatgcagcgatacctcagcgcactgttctctcaccgctta
gaggaggtgattcaggcatcgcgcaggctggttgcggagggcttcgccgccgcacaggtg
ctgcttcagatgcagcactaccttgtgagcgccgagtgtccgctgaactcggcccagcgc
ggcaagattatgctaaagctgtgtcagacagagcggcggcttgccgacgggggagacgac
tatctgcagctgctcgacattggaagcgctgtgtgctccgcataa
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integrated database retrieval system
