Leishmania infantum: LINJ_30_3300
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Entry
LINJ_30_3300 CDS
T01112
Name
(RefSeq) putative ATP-dependent RNA helicase
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
lif
Leishmania infantum
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lif03009
]
LINJ_30_3300
Enzymes [BR:
lif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LINJ_30_3300
Ribosome biogenesis [BR:
lif03009
]
Eukaryotic type
90S particles
Helicases
LINJ_30_3300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
OB_NTP_bind
HA2_N
AAA_19
ResIII
HA2_C
ATPase
AAA_24
AAA_16
Motif
Other DBs
NCBI-GeneID:
5071224
NCBI-ProteinID:
XP_001467178
UniProt:
A4I609
LinkDB
All DBs
Position
30:1187647..1190736
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AA seq
1029 aa
AA seq
DB search
MPKKATISFADLGLGTPLPSVLAKSRDERRKEQRVEKKERKERTREAMAEVAAARDIVEQ
HKRLVEAETAQERKLKEMHKRELRVEHLKARCEREESQRQHTAQLRVTQEKIITELRTAR
REEEAEMQRLQALLERETAERAKVAPANVHIEIHRTDEVKQQRAGLPVLREEQPIMEAIN
ETRRTCVLVCGETGSGKTTQIPQFLWEAGYGHPEGHLFGREGCILVTEPRRVAAVSMARR
VAEELNVSFGKEVCYHVRYDNNLSDKCRLKFATEGIVLKEIQSDFLLRKYSVIVIDEAHE
RSISCDILIGLLSRIVPLRNDMFEEELRKHHGDVDKTCIKPLKLVIMSATMRITDFKDNR
TLFPITPPLINIEARRYPVTNHFARRTELKEYVDQAFNKVRQMHKKLPPGGILVFVCTQQ
EIEDLCGRLRRHYAATKIEYYDNAYSKHRLLTGRSQEETAAASSDSEGGGVATAEEAEEK
DEYGLHTTDYALDDENVTCGNSKEIETVHEGRLRRSPQPSGGRGKYPRGEAGARLAGRDH
WGRSDEHSAAAAEGLTTFPGDEEQEEEVNGELNTLHVLPLYALLDFQKQQEVFKPPPKGT
RLCVVATNVAETSITIPNIKYVVDAGRAKSKVIDEETKASCFRIEWTSQASAEQRSGRAG
RVGPGHCYRLYSTAVYANLMAKHGDPEVLRTPLDSVVLLMKHIGVKNVGGFPFPSPPRES
DLKAALQHLSVIGALDAANNYNITKLGRQLVAYPVPPRFARALLEVLQQQKARSADVQDM
VAAIVAVATTTTNVFTGEGNQLKARKLNELADTPTDPRQGRIRSLLNPGSDLVTYLNAFY
AYRSDPWHSCGMFCLVQKSMHEARLLYTQLRSQMRQHNKEQDELADTLDEGEASVHEKSE
QKIGSHTSGGCPLSKETELLLRQVFIPGLMDQVARRATVHECRSLGVEYNDKRATKTPYL
VLGVNRTIAYIHPTSAVARTFPPPEYVTFGFLQKVHRSDTKVAQAMMMGVTVVTPEWLRA
YGFEEEEGD
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaaggcgacgatatcatttgcggatctcggcctcgggaccccgctgcccagt
gttctggcgaagtcccgcgacgagcgacgaaaggagcagcgagtcgagaaaaaggagagg
aaagagcgcacacgcgaggctatggccgaggtagcggcggcgcgtgacatcgtggagcag
cacaagcgccttgtcgaagcggagacggcgcaggagcgaaagctcaaagagatgcataag
cgtgagctgcgagtggagcatctgaaggcgcgctgtgagcgcgaggaaagccagaggcaa
cacaccgcgcagctgcgcgtgacacaggagaagatcatcaccgagttgaggacggcgcgg
cgggaagaggaggctgagatgcagcggctgcaggcactgctagagcgtgagacggcagag
agggcaaaggttgcgccggccaatgttcacattgagattcaccgcacagacgaggtgaag
cagcagcgtgctggtctgcctgttctgcgcgaggagcagccgatcatggaggccatcaac
gaaacgcgccgcacgtgcgtgttggtgtgtggcgagacgggcagcggcaagacaacccaa
attccgcagtttctgtgggaggcgggatacggccacccagagggccacctcttcgggagg
gagggctgcatactcgtcacggagccccgccgtgtggctgcagtgtcgatggcgcggcgt
gtggccgaggagctcaacgtttccttcgggaaagaggtgtgctaccacgtccggtacgat
aacaacctctctgacaagtgcaggctgaagtttgcgacggagggtattgtgctgaaggaa
atccagtccgactttcttcttcgcaagtacagcgtcatcgtgattgatgaagcacacgag
cgcagtatctcgtgtgacatcctgattgggctgctttctcgcatcgtgccgctgcgcaat
gacatgtttgaagaggagctgcgcaagcatcacggcgacgtggacaagacgtgcattaaa
ccactcaagcttgtcatcatgtctgccaccatgcgtattacagacttcaaggataaccgg
acactttttcccattacaccgccgctcatcaacatcgaggcgcgccgataccctgtcacg
aaccactttgcccgacgcacggagctgaaggagtacgtggaccaggcattcaacaaggta
cgccagatgcacaagaagctgccgccaggtggcattttggtgtttgtgtgcacccagcag
gagatcgaggatctgtgtggccgtctgcgtcggcactacgcggcgacaaagatcgagtac
tatgacaacgcctactcaaaacaccggcttctgaccggacggagccaggaggagacggct
gcggcgtcgagcgacagcgaaggcggcggcgttgccaccgcagaggaggcggaggaaaag
gacgagtacggccttcacacgacagactacgccctcgacgacgagaacgtgacttgcggc
aactcgaaggagatcgaaaccgtgcacgagggacgactgcgacgatctccccagccaagc
ggcggaaggggcaagtacccccgcggtgaggcgggtgcgcggctagccggcagggatcac
tggggtcgtagcgacgagcacagtgccgctgccgcagaggggttgacgacttttccaggc
gacgaggaacaggaggaagaggtcaacggggagttgaacaccctccacgttctcccgctt
tacgcgcttctcgactttcaaaagcaacaagaggttttcaagccaccgcctaaaggcact
cgcctctgcgttgtcgccaccaacgtggccgagacgtccatcacaattccaaatatcaag
tatgtggtggatgctgggcgggctaagtccaaggtgattgacgaggagaccaaggcgagc
tgcttccgaatcgagtggacaagccaggcttccgccgagcagcgcagcggccgcgcaggc
cgtgtggggccgggacactgctaccgactctacagcaccgcagtgtacgcaaacttgatg
gcgaagcacggagacccagaagtgcttcgcaccccgctcgattccgtcgttcttctaatg
aagcacattggggtgaagaacgtcggtggctttccgtttccgtcgccaccgcgggagtcg
gacttgaaggctgccctgcagcacctcagtgtcattggcgccctcgacgcagcgaacaac
tacaacattaccaagctgggtcggcagctggttgcgtacccggtgccgccacgatttgcg
cgggctcttctcgaggtgctgcagcaacagaaggcgcgatccgctgacgtgcaagacatg
gttgctgccatcgtcgcagtggccacgacgacgaccaacgtctttacgggagagggcaat
cagctcaaggcgaggaagctcaacgagctcgccgacactcccacagaccctcgacagggg
cgaattcgctccttgctgaaccctggaagcgacctggtcacttacctcaacgcattctat
gcctaccgcagcgatccgtggcatagctgtggcatgttctgcttggttcagaagagcatg
cacgaggcaaggcttctatacacccagctccgcagccagatgcgccagcacaacaaggag
caggacgagctggccgacaccctggacgaaggcgaggcctccgtgcacgaaaagagtgag
caaaagatcgggagccataccagtggtggatgccctttgtcaaaggagacggagctgctg
ctgcggcaggtcttcattccagggctcatggaccaagttgcgcgtcgcgcgacggtgcac
gagtgccgctcactcggggtggagtacaacgacaagcgcgctaccaagacaccatatctg
gtgctgggtgtaaaccgcactatcgcctacattcacccgaccagtgccgtggcgcgcacg
tttccgccgccggagtatgtgacatttggatttctgcagaaagtgcaccgttccgacaca
aaagttgcacaggccatgatgatgggcgttacggttgtgacgccagagtggctgcgtgcc
tacggcttcgaggaggaggagggagactag
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