Leishmania infantum: LINJ_32_1340
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Entry
LINJ_32_1340 CDS
T01112
Name
(RefSeq) putative RNA polymerase-like protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
lif
Leishmania infantum
Pathway
lif03020
RNA polymerase
lif03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LINJ_32_1340
09124 Replication and repair
03420 Nucleotide excision repair
LINJ_32_1340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lif03021
]
LINJ_32_1340
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_32_1340
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_32_1340
Transcription machinery [BR:
lif03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
LINJ_32_1340
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LINJ_32_1340
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
LINJ_32_1340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
5071873
NCBI-ProteinID:
XP_001467814
UniProt:
A4I7U5
LinkDB
All DBs
Position
32:503836..504435
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AA seq
199 aa
AA seq
DB search
MFYKVVLQRTVNVKPADLCNTLNRSLLTFLRQAVEGKPLPSPDSVASIALDYVTASKSSA
VVIAVLDILNAETLQGKVLDDGSVSFRLTYEAMVLKLHRGEVLDLLVSDVDETGFWASVY
GVNKLFVNRNQMGEDLKTGRSEWSFEAETAAWVSNDDRRSIKKDTMVRLRVIAETPQSER
GMAVGTIGAPFLGPRVGSY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgttctacaaggtcgtccttcagcgcacggtgaacgtaaagccggcggacctgtgcaac
acgctgaatcgcagtcttctgaccttcctgcgacaggcggtcgagggaaagccgctgccg
tcgccagacagcgtcgctagtatcgcactcgactacgtcacagcgagcaagtcctcggcg
gtggtaattgccgtgctggatatcctcaatgcggagacactgcaaggcaaggtgctcgat
gacggaagtgtgtcgttccggctcacctatgaggcgatggtgctgaaactgcaccgaggt
gaggtgctggacctgctggtcagcgatgtggacgagacaggcttctgggcgagcgtctat
ggcgtcaataagctctttgtgaaccgcaatcaaatgggcgaggacctgaagacgggaagg
tcggagtggtcttttgaggcggagacagccgcgtgggtcagcaacgacgatcgccgctcc
atcaagaaggatacgatggtgcgccttcgcgtgattgcggaaaccccgcaatccgaacgt
ggcatggctgtcggcaccatcggtgccccgtttctgggtccacgcgtcggcagctattag
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integrated database retrieval system
