Leishmania infantum: LINJ_32_1940
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Entry
LINJ_32_1940 CDS
T01112
Name
(RefSeq) putative chaperonin HSP60, mitochondrial precursor
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lif
Leishmania infantum
Pathway
lif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LINJ_32_1940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_32_1940
03110 Chaperones and folding catalysts [BR:
lif03110
]
LINJ_32_1940
03029 Mitochondrial biogenesis [BR:
lif03029
]
LINJ_32_1940
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lif04147
]
LINJ_32_1940
Enzymes [BR:
lif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LINJ_32_1940
Messenger RNA biogenesis [BR:
lif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LINJ_32_1940
Chaperones and folding catalysts [BR:
lif03110
]
Heat shock proteins
HSP60 / Chaperonin
LINJ_32_1940
Mitochondrial biogenesis [BR:
lif03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LINJ_32_1940
Exosome [BR:
lif04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LINJ_32_1940
Exosomal proteins of other body fluids (saliva and urine)
LINJ_32_1940
Exosomal proteins of breast cancer cells
LINJ_32_1940
Exosomal proteins of colorectal cancer cells
LINJ_32_1940
Exosomal proteins of bladder cancer cells
LINJ_32_1940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
5071930
NCBI-ProteinID:
XP_001467869
UniProt:
A4I800
LinkDB
All DBs
Position
32:complement(721445..723229)
Genome browser
AA seq
594 aa
AA seq
DB search
MLSRTVLRCVKYGSTPKDIRYGMEARNALLAGVENLVKAVGVTLGPKGRNVILEMPYASP
KITKDGVTVAKSIEFEDSFENLGANLVRQVAGLTNDNAGDGTTTATVLSGAIFKEGFRSV
ASGTNPMDLKRGIDLACREVLISLAEQSRPVTSKSEITQVAMISANMDQEIGSLIGDAMQ
QVGKDGVITTQEGRSLNTELELVEGMSFERGYTSPYFVTNTKAQRCELENALVYVANRKL
TSVAHILPALNYAIQQKRPLLVIAEDVEGEAMHTFLYNKIQGRISGCAVKAPGFGDMRIN
QLQDIAVFTGSQMISEDLGLSLDQNDFSERFLGTCRKVTVSRDECILMEGGGSAIAVEER
VQMIKDMISAEDHEYNRERLVERLAKLSGGVAVIKVGGASEVEINEKKDRIIDALNATRA
AVSEGILAGGGTGLLMASLRLESISKDRRLPPDIRTGVNIVKKAIGLPARYIANNAGVEG
SVVAGKVLARKDPSFGYNAQTGEYVNMFEAGIIDPMKVVKSAVVNACSVAGMMITTEAAV
VEKDLLGREKRIEDEGMEDREKKRSVDTLRKQVNERNAPMPKMAPPMKFEMKGL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccgtacggtgcttcgctgtgtcaagtacggctcaacgccgaaggacatccgc
tatggcatggaggcccgcaacgccctgcttgccggcgtcgagaaccttgtcaaggccgtc
ggcgtcacgctgggccccaagggccgcaacgtgattctcgagatgccgtacgcaagcccg
aagatcaccaaggatggagtcacggttgccaagagcatcgagttcgaggacagcttcgag
aaccttggggcgaacttggttcgtcaggtggcagggctgaccaacgacaacgccggtgac
ggcaccaccaccgctaccgtcctctccggggcgatcttcaaggagggcttccgcagcgtt
gcaagtggcacgaacccgatggacctgaagcggggcatcgacctcgcatgccgggaggtg
ctgatatccctggccgagcagtctcgcccagtcacctccaaatctgagatcacccaggta
gcgatgatctcggcgaacatggaccaagagatcggcagcctgatcggtgacgcgatgcag
caggtcggcaaggatggcgtaatcacaacgcaggagggtcgctcgcttaatacggagctc
gagctggtggaggggatgtccttcgagcgtgggtacacgtcgccgtactttgtgacgaac
acgaaggcgcaaaggtgcgagctcgagaacgccctcgtctacgtggcgaaccgcaaactc
acgagcgtggcgcacatcttgcccgcgctgaactacgccattcagcagaagcgtccgctt
ctggtgattgcggaggacgtggagggggaggccatgcacacgtttctgtacaacaagatt
caggggcgcatcagcggctgcgccgtcaaggccccgggctttggcgacatgcgcatcaac
cagctgcaggatatcgccgtcttcacggggtcgcagatgatttcagaagacctaggtctt
tcactggatcagaacgatttctccgagcggttcctcggcacttgtcgaaaggtgaccgtc
tcccgtgacgagtgcatcttgatggagggcggcggcagcgccatcgcggtggaggagcga
gtgcagatgatcaaagacatgatctccgccgaggaccacgagtacaatcgcgagcgtctg
gtcgagcgtctcgcgaagctctcgggtggggttgcggtgatcaaggtcggtggcgcatcg
gaggtcgagatcaatgagaagaaggaccgcatcatcgacgcgctcaacgccacgcgcgcg
gctgtgtcagagggcatcctcgcaggtggtggcaccgggttgctcatggcctctctgcgt
ctcgagagcatctctaaggaccgacgacttccacctgacatccgcactggcgtcaacatt
gtgaagaaggcaatcggtctgcccgcgcgctacatcgcgaacaacgcaggcgtcgagggc
agcgtggtggcggggaaggtactcgcgcgcaaggacccgagcttcggctacaacgcgcag
accggcgagtatgtgaatatgttcgaggctggcattatcgatcccatgaaagtagtgaag
tccgccgtcgtcaacgcatgctccgtggcgggcatgatgattacgacggaggcggcagtg
gtggagaaggacctgctagggcgagagaagcgcatcgaggatgaggggatggaggacagg
gagaagaagcgcagcgtcgacacactgcgcaagcaggtaaatgaacggaatgcgccgatg
cccaagatggcgccgccgatgaagtttgagatgaaagggctgtaa
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