Leishmania infantum: LINJ_33_0140
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Entry
LINJ_33_0140 CDS
T01112
Name
(RefSeq) putative trans-splicing factor
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lif
Leishmania infantum
Pathway
lif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LINJ_33_0140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lif03041
]
LINJ_33_0140
Spliceosome [BR:
lif03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
LINJ_33_0140
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
DUF6023
DUF7339
Motif
Other DBs
NCBI-GeneID:
5072168
NCBI-ProteinID:
XP_001468098
UniProt:
A4I8M9
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Position
33:complement(31442..32467)
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AA seq
341 aa
AA seq
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MDEGFDAHVATVTLEEIPAYEEHEVTLLSDDDALRYDSVTEVTKLLRSSYLSGMLRRLSD
YEQTTGRGKNCIPSDDPEYQYVSDCSSLVLRIEVEKSRVHVFLRAQYSIRFPELAMFFSD
SVLYAKVVKIIQNSVDLSSVVGQLDELIPSQLLVVVVACASTTSGRDLSPEELSRVLEAC
EELENLEMAKQTFLEYIQCSMPLICPNLCAFLGTGITSQLFAISGSVAKLSIMDPADLAR
LGSRRSNDSGIAIKTTGFLSNCDLVANLPPQLRPKALRLVSRVTLTLARIDANRRAPTNY
EGVRERRLACNRMRAWLDPPVLRGAGHNMYERRGRKRRRTS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggctttgatgcacatgtggcgaccgtcacccttgaagagatcccggcgtac
gaggagcacgaggtgacactgctgagcgacgatgatgcgcttcggtacgatagcgttacg
gaggtcacaaaactactccgctcgtcctacttgagtggaatgctacgtcgtttgagtgac
tacgagcagacaacgggtcgcggcaagaactgcattccatctgacgatcccgagtaccag
tacgtgtccgactgcagctcgttggtgctgcgcatcgaggtggagaagagtcgtgtgcac
gtctttctgcgtgcgcagtacagcatacgcttcccggagctggccatgttcttctctgac
agcgttctctacgccaaagtggtcaagataatccaaaacagcgtcgacctcagctctgtc
gttgggcaattggacgagctcattccgtcccagctgctggtggtggtggtggcatgtgcc
tccacgacgtctggccgcgatctgtctcctgaggagttgagccgtgtgctggaagcgtgc
gaggagcttgagaacctcgaaatggctaagcaaacgttcctcgaatacatccagtgctcg
atgccgctcatctgccccaatctgtgcgccttcctcggcaccggcatcacgtcgcagctc
ttcgccatctcgggtagcgtagcaaagctgtcgatcatggaccccgccgatttggcgagg
ctcggcagtcgacgctccaacgacagcggaatcgcaataaaaacaactgggttccttagt
aactgcgacctggtagcaaatctgccaccccagcttcggcctaaagcactacgcttggtt
tcacgcgttacactgacgcttgcgcgcattgacgcgaaccggcgcgccccaaccaactac
gaaggtgtccgtgagcgtcgtctggcgtgtaaccgtatgcgtgcttggctggacccgcca
gtgctgcgtggcgcagggcacaacatgtacgagcgccgcggtcgaaagcgtcggcgcacg
agctaa
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