Leishmania infantum: LINJ_35_3560
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Entry
LINJ_35_3560 CDS
T01112
Name
(RefSeq) putative structural maintenance of chromosome (SMC) family protein
KO
K06636
structural maintenance of chromosome 1
Organism
lif
Leishmania infantum
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lif03036
]
LINJ_35_3560
Chromosome and associated proteins [BR:
lif03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
LINJ_35_3560
Meiosis-specific proteins
Cohesin complex and associated proteins
LINJ_35_3560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
OmpH
RsgA_GTPase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
5073253
NCBI-ProteinID:
XP_001469160
UniProt:
A4IBP1
LinkDB
All DBs
Position
35:complement(1407699..1411667)
Genome browser
AA seq
1322 aa
AA seq
DB search
MLSKIHRVELDNFKSYYGKAVIGPFKDFTCVVGPNGAGKSNLMDALSFVLSSTVTQTSAS
SMRGKSAVDFIHRKAKTAGNGCRVTLVMRHPASKRAVAAAAVPAGDESGKSDTAASAARR
GAVVADDGEHVHHSSTVETSFTRQVDVQGTVSCLLNGKPVTEKEYVAALTEHRIGARVDT
FLVFQHQVEAVAQKKAKQLTELLEQVSGSGELHGEYATKKAALERANEALTSASLEKRGA
AVAVHQMRLAKKEAERYEELHQQLTSVRQELALSELFAVETELEKRKEELQQRRDALAEL
EKSIATEQTIREMKRTYATRHKTYLEELKKARKSADDLRLKHSTVERIKAALAHLTRKAE
LQRQELEAAQKATTVRTVEAERLEGQLKKQKALLDTFEKRCVADDTKRVTLNTVLNQQQL
DEYRQLRKEAECATVMLRQRRETVLRQRDSAQEALKQCDRAAEAHQQQMKDVSQAIETAA
KYGAELQQRRNELEETVSTLKAQLTEASKDLETMQKKNKAREVELARLQEQLHELRYMKD
TSKQNARMADALQALRSLFPIRGRMVDLCTVPNERHRNAVTVAMGKNLEGIVVETTAVAI
RCVKYLKEQRMPPMTFLPLDAVQGKAVDDRLRTFSGTCKPIVDVVRFEPELEPAVRYTLG
QTLLCDTVAEAKSVAYGRDGERFKVVTLDGTVLLKNGSVQGGLASVQSRARKWDEKKYED
LRVARDRLLSEAAAGGEAELARIQISIRDMEARREFAEKRVAVVHTEQCANDTKTQRLTE
ELAKLESRGADFATRHKGYAAELQVMHKELLELSKSISRVEGQVFADFQKKVGIPNLLNL
EGQQTQEAKQRAETRQQLLLVIHKLESSLEMEVKQVGDAKIADLEEACARLHKEKEQCKK
DLTDYKALVEKAERQHQETRKTAAQSRTELDSLEQQIRNATRNSETDLARVAQARKLVTG
IQLACDSLRLRRLNLVRRCQMDEIGIPLKPAASSGAKRARGEDTGAATRASSGLPTPSSR
QRSSATGSRTQILLSEPFTLLVEGGASQSGVRGATSAASSFASSPALDSETTMCIDFSSL
TEAQRVAAADRAQFSAYSHHAQAQLEALAAEMESLAPNMKAASRVMASEDRLGASSTLLD
EARDMARVANKDFTRVKEQRTARFMEMFEKVAATVDRVYRELTMGTRAHAVHGSAYLSLE
NVEEPYLGGTTYHATPPLKRFMPMELLSGGERTMAALALLFAIHEVSPTPFFVLDEVDAA
LDAGNVEKLASYLRKNCQSCQFVVVSLKEQLYHMADMLLGVMKDKDRESSKVITMDLRGY
AY
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcaaagattcaccgcgtagagctcgacaacttcaagagctactacggcaaagcc
gtcatcgggcccttcaaggatttcacatgcgttgttggacccaacggcgccgggaagtcc
aacttgatggacgcgctgagcttcgtgctgagcagcaccgtcacacagacgagcgcctca
tcgatgcgcggtaagtccgccgtcgacttcattcatcgcaaggcaaagacagcgggtaac
gggtgccgcgtgactttggtgatgcgccatccggcctcgaagagggcagttgctgccgct
gcagtaccggctggcgacgagtcgggcaaaagcgataccgctgcgtccgctgcccgtcgt
ggcgcggtcgtcgccgacgacggggagcacgttcatcacagcagcaccgtcgagacctct
tttactcgccaagtcgatgtgcagggtacggtctcatgcctgctcaacggcaagccagtg
acagagaaggagtacgtggccgcgcttaccgagcaccgcattggcgcccgtgttgacacg
tttctcgtgtttcagcatcaggtggaggcggtcgcgcagaagaaggcgaagcagctgacg
gaactactcgagcaggtcagcggcagtggtgagcttcatggtgagtacgctaccaagaag
gccgcactggagagggccaacgaggcgctgacgagtgcgtctctcgaaaagcgcggggct
gccgtggcggtgcatcaaatgcgactagccaagaaggaggcggagcgctacgaggagctg
catcagcagctgacgagcgtcaggcaagagctagccctctccgagctcttcgccgtcgaa
acggaacttgagaagcgcaaggaagagctgcagcagcgccgcgacgcgcttgcggaactg
gaaaagagcattgcaacagagcagacaatccgggagatgaagcggacgtacgcgacccgg
cacaagacgtacttggaggagctgaaaaaggcgcgtaagtctgccgatgatctgcggctt
aagcacagcacggtggagcgcatcaaagccgccctggcgcacctaacccgcaaggcagag
ctgcagcgacaggagctggaagcggcgcagaaggcgacaactgtccgcactgtcgaggcg
gagcggcttgaggggcagttgaagaagcaaaaagcgctgcttgacacttttgaaaagcgc
tgcgtcgctgacgacacgaagcgagtcacgctgaacaccgtgctcaatcagcagcagctg
gatgagtaccggcaactgcggaaggaggcggagtgcgcgaccgtgatgctacgccagcgc
cgggagacggtgctgcggcaacgcgactccgcacaggaggccctgaaacaatgcgacaga
gccgcggaggcacaccagcagcagatgaaggacgtcagccaggccattgagacggccgcg
aagtacggggctgaactgcagcagcgccgcaacgagttggaggaaacggtgagcacgctc
aaggcccagctcacggaagccagtaaggaccttgaaacaatgcagaagaaaaacaaagca
cgggaggtggagttggcacgactgcaggaacagttgcacgagctgcgctacatgaaagac
acaagcaagcagaacgcgcgcatggcggacgctctccaggccttgcgctctctcttccca
atccgcggacgcatggtggatctgtgcacggtgcccaacgagcggcaccgcaacgcggtc
acggtggccatgggcaaaaacctcgaggggatcgttgtggagacgaccgcggtggcaatt
cgctgcgtcaagtatctgaaggagcagcgcatgccgcccatgacgtttctgccgttggac
gcagtgcaaggcaaggctgttgacgaccgtctgcgcacatttagtggcacatgcaagccc
attgtcgatgtggttcgctttgagcctgagctggagccggcggtgcggtatacactgggt
cagacgctgctgtgcgacacggttgccgaggccaagtcggttgcctacggccgcgacggg
gagcgcttcaaggtggtgacgctggacggcacagtcctcctgaagaacgggtctgtgcaa
ggtggtttggcctccgtacagagccgcgcccgcaagtgggacgagaagaagtacgaggac
cttcgcgttgcccgcgaccgcctgttgagcgaggccgccgcaggtggtgaggcagagctg
gctcgcatccagatctcgattcgggacatggaggcgcggcgcgagtttgctgagaagcgc
gtcgctgtagtgcacacggagcaatgcgctaacgacaccaagacgcagcggctgacggag
gagctggcgaagctggaaagccgcggagccgatttcgcgacgcggcacaagggatacgcg
gcggagctgcaggtgatgcacaaggagctgctggagctctccaagtcgatctcgcgcgtc
gagggacaggtttttgctgacttccagaagaaggtgggcatccccaacctgctaaacctg
gaaggacagcaaacgcaagaggcaaagcagcgcgccgagacccggcagcagctgctactc
gtgatccacaagctggagagctcgctcgagatggaggtgaagcaggtcggcgacgcaaag
atcgccgatttggaggaggcgtgtgcgcggctgcacaaggaaaaggagcagtgcaaaaag
gacctcaccgattacaaagcgctcgtggagaaggcggagcggcagcaccaggagacgagg
aagacggctgcgcagagccgcaccgagctcgactcgctggagcagcagattcgaaacgcg
actcgaaactccgagactgatctggctcgtgtcgcccaggcgcggaagctcgtcacaggc
attcagcttgcctgcgactctctgcggttgcgtcggctgaacctggtgcgccgctgccag
atggacgaaatcggtattccactgaagccggcggccagcagcggagcgaaacgcgcgcgc
ggcgaggatacgggcgcggccacccgtgcctcctccgggctgcctacgccgtcgtcgcgc
caaaggtccagcgccacggggagccgcacgcaaattcttctctccgagccgttcacactg
cttgtcgaaggcggagcgagccagagcggcgttcgcggagcaacgagcgccgcatcttct
tttgcctcctcgccggccctcgactcagaaacgaccatgtgcatcgacttctcctcgctc
acggaggcacagcgggtggcggcagcggaccgggctcagttttctgcgtacagccaccat
gcccaggcgcagctggaggcgctcgccgccgagatggagtctctggcgccaaatatgaag
gccgcctcgcgcgtcatggcatcggaagatcgtcttggggcgtcgtcgacgctgctcgac
gaggcccgcgatatggcccgtgtggccaacaaggacttcacccgcgtcaaagagcagcgc
acggcgcgcttcatggagatgttcgagaaggtggcggccacagtggaccgggtgtaccgc
gagctcaccatgggcacccgcgctcatgcagtgcacggctcggcgtaccttagcctggag
aatgtggaggagccgtacctcggcggcaccacctaccacgccacaccgcctctcaagcgc
ttcatgccgatggagctgctctccggcggcgagcgcaccatggcggcgctggcgcttctc
tttgcgatccacgaagtctccccgacgcccttcttcgtgctggatgaggtggacgcggcg
ctagacgccggcaatgtagagaaacttgcgagctaccttcgcaaaaactgccagtcgtgc
cagttcgtcgtggtttcgctgaaggaacagctttaccacatggcagatatgctgctgggc
gttatgaaggacaaggatcgggagagctccaaggtgatcaccatggacctgcgtggctac
gcgtactag
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