KEGG   Leishmania infantum: LINJ_35_3920
Entry
LINJ_35_3920      CDS       T01112                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
lif  Leishmania infantum
Brite
KEGG Orthology (KO) [BR:lif00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lif03009]
    LINJ_35_3920
   04121 Ubiquitin system [BR:lif04121]
    LINJ_35_3920
Ribosome biogenesis [BR:lif03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    LINJ_35_3920
Ubiquitin system [BR:lif04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     LINJ_35_3920
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Sof1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Vps41 ANAPC4_WD40 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 KNTC1_N WDR54 eIF2A Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 5073289
NCBI-ProteinID: XP_001469195
UniProt: A4IBS6
LinkDB
Position
35:complement(1525037..1526371)
AA seq 444 aa
MVKIKTISRSELEWTKDRATEVPKVNRNYDPKFNPMAKQVEFTRAVVAAKMDRMFAKPFV
AALSGHQDTIQSIATDITSLSTVATGSVDGGLIVWDAMTRKQRAVINAHRHSVDGVAISP
DGVACFSASRDKTVRMWDLDFDPGEERIEPVAEFLGEFPFSSIDHHFHKSWFATSSDVVS
IWDVNRTQPLQRFSWGDDTVSSCQFNKIETNLVACCMADRGVFLYDVRSQSAHSKIVMEM
CSTSLSWNPMDPNVFVTGSDDRNCYLFDIRVPGRPRNVFQGHIRPVTCVDFSPTGTMFAA
GSQDASLRIWDLHQTSKSDSIEMFHTKRMAGVYAVKWSPDNSYIYSGSEDAVLRVWKSDA
SKPIRPLRGPEKHKFNYMRSLKSKYSNFVEVKRISNQCNAPKAILRTSRRIKKAEKREAV
KEMSRIHGDNVKPLAKRKTYGYVE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggtcaagatcaagacaatcagccgctccgagttggagtggacaaaagatcgcgcgacg
gaggtgcccaaggtcaatcgaaattatgatccgaagtttaatcccatggcaaaacaggta
gagttcacacgggcggtggttgctgccaaaatggaccgtatgtttgcaaagccttttgtg
gctgcgctctcgggccaccaggataccattcagtcgatcgctactgatattacaagcctg
tccaccgtagccacgggctctgttgacggcgggctaatagtatgggatgcgatgacgcgg
aagcagcgtgcggtcatcaacgcacatcgacactctgtcgacggcgtggccatctcgcca
gatggcgtcgcttgctttagcgcttcgcgtgacaaaacagtgaggatgtgggatttggac
ttcgaccctggtgaagagcgtattgagccggtggcagagtttctcggtgagtttcccttc
tcctccatcgatcaccatttccacaagtcgtggttcgccacgtcgtcggacgtggtgagc
atctgggatgtcaatcgcacgcagcccctccagcggttttcttggggggacgacacggtg
tcttcctgccagtttaacaagattgagaccaatttagtcgcatgctgcatggcagatcgc
ggtgtcttcctgtacgacgttcgcagtcagtccgcccacagcaagattgtgatggagatg
tgttcaacatcactttcgtggaacccgatggacccgaacgtgttcgtgacgggaagcgac
gaccgcaactgctacttattcgacatacgcgtgcctggacgtccgcgcaatgtcttccag
ggtcacatccgtcctgtcacatgtgtcgactttagtccgactggcaccatgtttgccgcc
ggatcgcaagacgcctcgttgcgcatttgggacctgcaccagacatccaagtctgactcg
attgagatgttccacacgaagcggatggccggcgtgtacgcggtgaagtggtctcccgat
aacagctacatttacagcgggagcgaagatgcggtgctgcgtgtgtggaagtccgacgcc
agcaagccgattcgtccactacgcggcccagagaagcacaagttcaactatatgcgctct
ttgaagagtaagtactccaacttcgtcgaggtgaagcgaattagcaaccagtgcaatgca
cccaaggcaattctgcgcacttcacgccgtatcaagaaggccgagaagcgcgaggcagtg
aaagagatgtcgcgcattcacggcgacaacgtgaagccgctggcgaagcgcaagacctac
ggctacgtggagtag

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