Leishmania infantum: LINJ_35_4080
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Entry
LINJ_35_4080 CDS
T01112
Name
(RefSeq) putative ATP-dependent RNA helicase
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lif
Leishmania infantum
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lif03009
]
LINJ_35_4080
Enzymes [BR:
lif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LINJ_35_4080
Ribosome biogenesis [BR:
lif03009
]
Eukaryotic type
Pre-60S particles
Helicases
LINJ_35_4080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
5073305
NCBI-ProteinID:
XP_001469210
UniProt:
A4IBU1
LinkDB
All DBs
Position
35:1596105..1598177
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AA seq
690 aa
AA seq
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MKGVKLSEPTLAFLRDNMKFTTMAPVQARTIPLFLTNYDVVVEAITGSGKTLAYLIPCLE
MLLRPRCREVAKEYKNAVFAVLVLPSRELAQQVFQIVKRMLHFVTKEYKNGSPANGLPAY
SYQCYIGGRDIKHDVEEFSKQGGNVLVGTPGRLYELLVSSKHANLFHLSQFELLILDEAD
KLLEFGFRAKLDALLKRLPKQRRTGLFSATQTKELTELARAGMRNPVSVTVRINSLNSAD
SDTAKPQIPEQLSNFFAFTRASQKLDRLVEFLASHKDEKVLVYVMTCASVEWLYEALSAV
LWKDEADNVFALHGQMKLEKRQKVHRQVTKRSRCVLVCTDVAARGLDIPEVGVVVQYDPP
VDPNTFIHRIGRTARMGRSGKSVVFLMPQELEYINFMRLQNVPLQALDGERDSVDAAKDA
VRNMNARRTLLSSELPDKRKAIHQAHREKQLSRRERRQQLHEAHQAMVEGKSQRLAKRKE
VLGDMCASPSILALRREECRNEKLLNLATRAFVSFLRAYKEHECRYIFQLQLIDLTDLTH
GFALFKIPNCGEIKRMRVLRIPLQDEFAPFVRQMATELREKRQRASEEHSAAAALDGGGD
DGRDAKRHRTERNEKLEALKLLKMSKSERSRAWKQAELDELLKDSYYVKMERRGKVNRHV
VDEKMGVKAIENSFMSARERKEAQLARKAR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaagggggtcaagcttagtgagccgaccctcgcgttcctccgcgacaacatgaagttc
acgacaatggctcctgtccaggcccgcaccattccactcttcctcaccaactacgacgta
gttgtggaggccatcaccggcagcggcaagacgctcgcataccttattccgtgcctggag
atgctgctgcgcccacggtgccgcgaggtagcaaaggagtacaagaacgctgtcttcgcc
gttctcgtgctgccatcgagggagttggcgcagcaggtgtttcagattgtaaagcgcatg
ttgcactttgtgacgaaagagtacaaaaacggcagcccggcgaacggtcttcccgcctac
tcgtaccagtgctacatcggcggacgcgacatcaagcacgacgtcgaggaattcagcaag
cagggcggcaacgtgctagtcggcacaccgggccgcctctacgaactgctcgtctcctcc
aagcacgcgaacctctttcacttgagtcagttcgagcttctcattctcgacgaggctgat
aagctgctcgagttcggcttccgggcaaaactggatgcgctgctgaagcggttgccgaag
cagcgccgcaccggtctgttcagtgcgacgcagacaaaagagctgacggagctggcgcgg
gctgggatgcgcaacccggtgtcggtcactgtccgcatcaactccctcaactccgccgac
agcgacactgcaaagccgcagatacccgagcagctctctaacttcttcgccttcacgcgg
gcttcgcagaagctggaccgcctcgttgagttcctggcgtcgcacaaggatgagaaggtg
ctggtgtatgtcatgacgtgtgccagcgtggagtggctctacgaggcgctctcggcggta
ctgtggaaagacgaggcggacaacgtcttcgccctccacggccaaatgaaattggagaag
cgtcagaaggtgcaccggcaagtgacgaagcgctcgagatgcgtgctcgtgtgcaccgac
gtggcggcacgcgggttggatatcccggaggtgggcgtggtggtgcagtacgacccgccg
gtggaccccaacacgttcatccaccgcatcggccgcacggcgcgcatggggcgcagtggt
aagagtgtcgtctttctcatgccgcaggagctggagtacatcaatttcatgcggctgcag
aacgtacctctccaggcgctagacggggagcgggacagcgtcgacgccgccaaggatgcg
gtgcgtaacatgaacgcgcgacgcacgctgctcagctccgagctgccggataagcggaag
gcgattcaccaggcgcaccgtgagaagcagctgagtcgaagagagcgccgccagcagctg
catgaggcgcatcaagcgatggttgaagggaagagccagcgacttgcgaaacggaaggag
gtgctgggcgacatgtgcgcgagtccctccattcttgcgctgcggcgagaggagtgccgc
aatgagaagctgctgaacctcgccacccgggccttcgtgtcgttcctgcgggcctacaag
gagcacgagtgccgctacatctttcaactgcagctcattgacctcaccgacctcacgcac
ggcttcgcgcttttcaagatccccaactgcggtgagatcaagcggatgcgtgtgctgcgc
attcctttgcaggacgaattcgctccgtttgtgaggcagatggctactgagctgcgggag
aagcggcaacgtgcttccgaggagcattcagccgcggcagctctggacggcggcggcgat
gacggccgagacgcgaagagacaccgcacggagcgcaacgagaagctggaggcgctgaag
ctgctgaagatgtccaagtccgaacgcagccgcgcctggaagcaggcagagctggacgag
ctgctcaaagatagctattacgtgaagatggagaggcgcggaaaggtaaaccggcacgtg
gtggacgagaagatgggcgtgaaagcaatcgagaactctttcatgagtgcgcgagagcga
aaggaggcgcagcttgcccgcaaggcgcgctga
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