KEGG   Leishmania infantum: LINJ_35_4430
Entry
LINJ_35_4430      CDS       T01112                                 
Name
(RefSeq) putative DNA polymerase epsilon catalytic subunit
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
lif  Leishmania infantum
Pathway
lif03030  DNA replication
lif03410  Base excision repair
lif03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LINJ_35_4430
   03410 Base excision repair
    LINJ_35_4430
   03420 Nucleotide excision repair
    LINJ_35_4430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lif03032]
    LINJ_35_4430
   03400 DNA repair and recombination proteins [BR:lif03400]
    LINJ_35_4430
Enzymes [BR:lif01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LINJ_35_4430
DNA replication proteins [BR:lif03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    LINJ_35_4430
DNA repair and recombination proteins [BR:lif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      LINJ_35_4430
SSDB
Motif
Pfam: POL2_thumb DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 zf_DPOE_2 zf-DPOE
Other DBs
NCBI-GeneID: 5073340
NCBI-ProteinID: XP_001469245
UniProt: A4IBX6
LinkDB
Position
35:1733184..1739858
AA seq 2224 aa
MSSFGPQIISEIIAVEKEDLDLVNHLSGKKRVYLKVVFRNVQDLTTVRGRLEKTVKLNAS
LGSENPLRSQFSGSLGDAMAKPFAEDPLYSAAGSSRWMDWVQDIREYDVKYHMRVAIDMK
VYCGLWYDVTVTEGGARVQRCDDSRYAPAMPRVIAFDIETTKAPLRFPQPEVDEVYMISY
MLDGRGYLIINREIVTEDIAPFEYTPKPEYEGFFDTFNEENEAATLRRFFDEMRKYKPNV
YVTYNGDYFDFPFIHARALYHGMNMRNEIGFTQMADGAFLNKQIPHLDCFYWVKRDSYLP
QGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSQPQRMASYSVSDAVSTWYLYQKYVHPFI
FSLATIIPMPPDDVLRKGSGGLCESLLMVQAEANNVVFPNKKETERERFYEGHLIDTETY
IGGRVEALRSGVYRSDIPMTFDMNPDTYQSLIDDVDEALRFTLEVENGVKVEEVTNLEEV
RAAILAKLTNLRDRPHQQEKPFIYHLDVGAMYPNIILTNRLQPYAIARPDVCAGCCFNSP
NNEAQCKRVMSWKWRAELFTAGRYEFQRVKAQLENESFAAGVIEQANLAAVQKKAYGNRK
GNVLEGTSYERKDDWKKSQSSRKGGGGAGYRQESRQQQREAADALLQREFGADRNGEGGS
SDSDGDADGPKAYHKLNENTQFNMLKRRLSEYSRKAYGKIHETREVMRSNVVCQRENSFY
VDTVRLFRDRRYEYKAALKTWKKRLDAAKDSDERKVCQSRCVQMESLQLAHKCILNSFYG
YVMRKGSRWSSMEMAGIVTYLGATLIQMARSLVQQIGVTLELDTDGIWCCLPNTFPENFT
LATTNPSKPKISISYPCVVLNKMVHDRYSNHQYQDLVSTGVYKTRSECSIYFEVDGPYLA
MLLPASREEGKSIKKRYAVFSPDGSLAELKGFELKRRGELMLVKDFQSQVFRRFLDGRTL
ADAYASAAVVADAALDMLESKGEGYDTEEILEKITESSNMTRRLSEYPESQKSLAITTAR
RIAEFLGPQMVKDKGLACHFIISRMPAGRPVTERAIPVTIFRADPAVRTHFLRKWTADTT
VPSELNLKTLLDWDYYTARFSACVQKIVSIPAALQSLPNPVPRVVHPDWLEKRIRHRNSR
YRQVSLVGMLSKVQGKNEALAGVSAAAAAAAAVRVDEDEDGVVLEQGGGAGAVEGELQDL
EDMAGGAGSSTVRHVPKTQKARAACAGERRCAAGTDAETDWDEDDTDCEGESEDDMERLQ
READAELDALAHDVKQRYFAPRSANALDADFFADRGAKRWLAQRKDTWLQRARLRRELAL
ENGLSEVALGGENSDAVALGQATAPDVAGMNSHFIDLKSRALATVWNVLEVRENEESPGT
VQVLAALEHSLYSFRVQVRRTVLVDADPALRLQAFDATEVSGRVLPRRAAAGRLYQVNVP
PGEEGERCLNALHVMEGVRRIYEEHRTRVDTFVEQLGCCVSVDSARHLRNARRRPPSQRE
LFGIDEMNMHTCTNYLSCGAADRAVFVFHAVTEQRGLIAAVYPQTNTAFVVFIQPAEAAK
PVISWSSICAESAKRLHTSTPEPIRVTSAVAEDQRAAWRQVHQHLSAALENAKAPLLAVL
QSCQPTSTLLQQRALPVGLPYLRVLGAAEDERLLSDPFRWTRLLARRLFERFFASLLWVE
ERLALSRVSGIPLCNIAQDSCVHVLDVLYSRALHRRHHVLWCSSDPLITFDTVEERPREV
CMAGGYTSWCVEFGLSRLDVVALLFSQAIEEGDDPNARVLCDRGVSTHFNILRDLVADLL
GQAMENILADTLLNNVARWLRDPASSCYEPRLVELLSSLAHRALTGILLRLAKLGGRAVK
VDGSSVTVLTSKYSLQEAVSFARFLTASLQDQPMLLLLSLQPLRYWCPYVVLDPCDYAGL
FITEDAIKLKQGEEPTRADLHVAHQLTMASRLPSRARNTFVERVVETLYQLNASTHHVYC
DTVGDHTVTLATRHDHLTRRLLQDSQKLFEGVLQTDIMDEVQRVMDTRDLYTEEEHAAHE
RGELTLWSSGAVALEYAKCVCRVLELIPCNGAVGKVRNNCMRLCGISPFSAQSQFQADPF
LAHRLQSVTCSFCNSHISIDLLVRRKSVTSPFTCTACAAPIAAASMEGTLVRHVSQLLRV
YNQQDFVCTKCREMTTTYVAERCCGALVGKAAPVEGELRALHRLAKIQGFAWLAESVEAA
LLCT
NT seq 6675 nt   +upstreamnt  +downstreamnt
atgtccagcttcggcccgcagatcatcagcgaaattatcgccgtggaaaaggaagatctc
gatctcgtgaaccatctgagtggtaagaagcgcgtctacctcaaggtggtcttccgtaat
gtgcaggacctcacgacggtgcgcgggcgactggaaaaaaccgtcaagctcaacgcctcc
ctcggttccgagaacccgctgcggagccagttcagcggctcgctcggtgacgccatggcg
aaaccgttcgctgaagatcccctttacagcgcagccggtagcagtcggtggatggactgg
gtgcaggacatacgcgagtacgacgtgaagtaccacatgcgcgtcgccatcgacatgaag
gtgtactgcggcctctggtacgacgtgacggtcacggagggaggcgcgcgtgtgcagcgg
tgcgacgacagccgctacgcgccggccatgccacgtgtcatcgccttcgacattgaaacg
acaaaggcccctctgcgctttccgcagccggaggtggatgaggtgtacatgatatcctac
atgctggacggtcgcggctacctgatcatcaaccgcgagatcgtgacggaggacatcgcg
ccgttcgagtacaccccaaagcccgagtacgagggcttcttcgacaccttcaacgaggag
aacgaggcagcgacgctgcgacgcttcttcgatgagatgcgcaagtacaagccgaacgtc
tatgtcacgtacaacggcgactacttcgacttccccttcatccatgcccgtgccctgtac
cacggcatgaatatgcgcaatgagatcggcttcacgcagatggccgacggcgccttcctg
aacaagcagatacctcacctcgattgcttctactgggtaaagcgggactcgtacttgccg
cagggcagtcaaggcttgaaggcggtcaccaagtacaagctcggctacgagcctatcgag
gtggaccccgaagacatgctccctctcgcgcagtcgcagccgcagcgcatggcctcgtac
tcggtgtcggacgctgtgtcgacgtggtacctctatcagaaatacgtgcaccccttcatc
ttttccctcgccacaattattccgatgccaccagacgacgtactgcgcaagggctcgggc
ggcttgtgcgagtcactgctgatggtgcaggcagaggcgaacaacgtggtgtttccgaac
aagaaggaaacagagcgggagcgtttctacgagggtcacctgattgacacggagacctac
atcggcggccgtgttgaagcgctgcgcagcggcgtgtaccgctccgatatcccgatgacg
ttcgacatgaatcctgatacctaccagagtctcatcgacgacgtcgacgaagcactccgc
ttcaccctcgaggtggagaacggtgtgaaggtagaggaggtaacgaatctggaagaggta
agggcggccatcctcgccaagctaacgaacctgcgcgaccggccgcaccagcaagagaag
ccgttcatctaccacctcgacgtcggcgccatgtacccgaacatcatcctcacaaaccgc
ctgcaaccgtacgccattgcgcggccagacgtgtgcgctggatgctgcttcaactccccg
aacaacgaggcgcagtgcaagcgtgtcatgtcgtggaagtggagggccgagctcttcacc
gccggccgctacgagtttcagcgggtcaaggcccagctcgagaacgagtccttcgccgcc
ggcgtgattgagcaggcaaacctcgcggccgtgcagaaaaaggcgtacggcaaccgcaag
ggcaatgtactggaaggcacctcgtacgagcggaaagacgactggaaaaagagtcagagc
agtcgcaagggcggcggcggtgccggataccgacaagagtcacggcagcagcagcgcgag
gctgccgacgcgcttctccagcgcgagttcggtgccgatcgcaacggtgaaggcggcagc
tccgactcggacggcgacgccgacggcccaaaggcgtaccacaagctcaacgagaacacg
cagttcaacatgctgaaacggcggctcagcgaatatagccgaaaagcctacggcaagatt
cacgagacgcgtgaagtgatgcggtccaacgtggtgtgccagcgcgagaactccttctac
gtcgacacggttcgcctttttcgcgaccgccgctacgaatacaaggcagccctgaagaca
tggaagaagaggctggacgctgcgaaggactcggacgagcgcaaggtgtgccagagtcgc
tgcgtgcagatggaatcgctgcagctggcccacaagtgcatcctcaactcgttttacggc
tacgtgatgcgtaaaggctcgcggtggtcgagtatggaaatggcgggcatcgtcacctat
ctcggcgcgacgctgattcagatggcccgctcgcttgtccagcagatcggtgtgacgctc
gagcttgacacggatggcatctggtgctgtcttcccaacacgtttcccgagaacttcact
ttggccacgacaaacccgtccaagccgaagatatcgatatcgtacccgtgcgtcgtgctg
aacaaaatggtgcacgatcggtactcaaatcaccagtaccaggaccttgtcagcacgggc
gtgtacaagacgcgcagcgagtgctcgatctactttgaagtagacggcccgtacctcgcc
atgctgctgcctgccagtcgcgaggaaggcaaaagcatcaagaagcgctacgccgtcttc
agcccggacggcagcttggccgagctcaaggggtttgagctgaaacgtcgcggagagctg
atgcttgtcaaggacttccagtcacaggtgttccgccgcttcctcgacggcaggacgctc
gctgacgcgtacgcctcggcggctgtcgtggcggatgccgcgcttgacatgcttgagtcc
aaaggcgaaggctacgatacagaggagattctggagaagattacggagagcagcaacatg
actcggcgactctccgagtaccccgaatcgcagaagtcgctggccatcacgacagcacgg
cgcattgccgagttcctgggaccgcaaatggtaaaagataagggcctggcgtgccacttc
atcatctcacgcatgccggccggccgccccgtcacggagcgggcgatccccgtcacgatc
ttccgcgcggacccggcagttcgcacgcattttctgcgcaagtggaccgccgacacaacg
gttccgtccgagctgaatttgaagacgctgctggactgggactactacactgcacgcttc
agcgcctgcgtgcagaagattgtgtctatcccggcggcgctgcagtcgctgccgaacccg
gtgccgcgcgtggtgcacccggactggctggaaaagcgcattcgtcaccgcaactcccgc
taccgtcaagtgtcacttgtcggcatgctatccaaggtgcaaggcaagaacgaggcgctg
gctggcgtgtcggcggcggcggccgccgccgctgccgtcagagtggacgaggacgaggac
ggggtcgtgctggagcaggggggtggtgcgggcgctgtagagggagagctgcaagacttg
gaggacatggcgggcggtgcaggcagcagcaccgtacgccacgtgccaaagacgcaaaaa
gcccgtgcggcctgtgctggtgaacgacgatgtgccgcggggacggacgctgaaacggac
tgggacgaagacgacacggattgtgagggggagtcggaggacgacatggagcggctgcag
cgcgaggcggatgccgagctggatgcgctggcgcatgatgtaaaacagcgctactttgct
ccaaggagcgcgaacgcgctcgacgcagattttttcgccgaccgtggtgcgaagcgttgg
ctggcccagcgcaaggacacgtggctacagcgagctcgtctgcgcagggagctggcgctc
gagaacggcctgagcgaggtcgctctgggtggggagaacagtgacgcagtggctctcggg
caagcgacggcgcccgatgtcgctggcatgaacagccacttcatcgatctaaagtcacgt
gcgctggcgaccgtctggaacgtgctcgaggtgcgcgagaatgaggagagtcccggaact
gtgcaggtgcttgcggcgctggagcatagcctctactcctttcgcgttcaggtgcgtcgc
accgtccttgtagacgcggaccccgcgctgcgcctgcaggcgttcgacgccactgaggtc
agcgggcgggtgctgccgcggcgtgcagcagccggccgcctctaccaggtcaatgttccg
cctggcgaggagggggagcggtgcctcaatgcgctgcacgtgatggagggcgttcgccgg
atctacgaggagcatcgcacgcgcgtggacacgttcgtcgagcaactcggttgctgcgtc
tccgtcgactcggcgcggcacctgcgcaacgcgcgtcggcgcccaccttcgcagcgtgag
ctctttggcatagatgagatgaacatgcacacgtgcacgaattatctcagctgtggcgcc
gcggaccgtgccgtgttcgtcttccacgcggtgacggaacagcgcggtttgatcgctgcc
gtttatccgcagaccaacactgccttcgtcgtctttattcagcccgctgaagcggcaaag
cccgtgatcagctggagcagcatttgcgcggagagcgcaaagcggctgcacacgagcacg
ccggagccgattcgggtcacatccgcggtggcggaggatcagcgagcagcgtggcggcag
gttcatcagcacctgagcgccgccttggaaaacgccaaggcgcctcttctggctgtgctg
cagagctgccagcccacgtcgacactcctgcagcagcgcgcgttgcctgtgggactgcct
tacctgcgtgtcctcggcgctgcggaagatgagcggctgctgagcgacccgttccgctgg
acgcgcctgctggcgcggcgactgtttgaacgcttcttcgcgtcgctattgtgggtagag
gagcgtctggcgctgagccgtgtctctggcatcccgctttgcaacattgcccaggacagc
tgcgtgcatgtgctggatgtgctgtacagtcgtgccctacaccggcgccatcacgtgctg
tggtgcagcagcgaccctctcataacttttgacaccgtggaggagcgtccgcgcgaggtg
tgcatggctggcggctatacttcgtggtgcgtcgaattcggcctttcgcgcctggacgtc
gtcgcgctgctcttctcacaggcgattgaggaaggcgatgacccgaacgcgcgggtgctg
tgtgaccgtggcgtatcgacgcacttcaacatcctgcgtgatctggtggccgacttgctg
gggcaggccatggagaacatcctcgccgacacactcctgaacaacgtggcgcggtggctg
cgcgacccggcgtcgtcctgctacgagccgcgcttggtggagcttctcagcagtctcgca
caccgtgcactcacgggcatcctgctccgcctcgccaagctcggcggccgcgccgtaaag
gtggacggcagttccgtcaccgtcctcacctccaagtactcgcttcaggaggcggtgagc
ttcgcccgctttctgacagcatcgctgcaggaccagccgatgctactgctgctctcgctg
cagccactgcgctactggtgtccatatgtggtgcttgacccttgcgactacgctggcctg
ttcatcaccgaggacgccatcaagctcaagcagggcgaggagccgacacgagcggatctg
cacgtagcacatcagctcacgatggctagccgacttcccagccgtgcccgcaacactttt
gtggagcgcgttgtcgagactctctaccagctgaacgcgtcaacacaccatgtctactgc
gacacggtaggcgatcacacggtcacgctcgctacgcggcacgaccacctgacgcggcgc
ttgttgcaggactcgcagaagctctttgaaggtgtcttgcagacagacatcatggacgag
gtgcagcgcgtgatggacacgcgcgacctgtacaccgaggaggagcacgcagcacacgag
cgcggcgagttgacgctgtggtccagcggcgccgttgcactcgagtacgcgaagtgtgtg
tgtcgtgtgctggagctgatcccgtgcaacggcgccgtcggcaaggtgcgcaacaactgc
atgcgtttatgcggcatcagcccattctccgcccagtcgcagtttcaggccgatcctttc
ctggcgcaccgccttcagtccgtcacgtgcagtttctgcaactctcacatctcgatcgac
ttgcttgtgaggcggaagtcggtgacatcgccatttacctgcacagcgtgtgcggcgcca
attgcggcagcttccatggaaggaacgctcgtccgtcatgtgagccagctgctgcgagtt
tacaaccagcaggacttcgtgtgcaccaagtgtcgtgagatgacaacaacctatgtggcg
gaaaggtgctgtggcgcgctcgtcggcaaggccgcgccggtagagggcgagctccgggca
cttcatcgccttgcgaagatacaaggctttgcgtggcttgccgagagcgtggaggcggcg
ctcctctgcacgtga

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