Leishmania infantum: LINJ_36_1920
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Entry
LINJ_36_1920 CDS
T01112
Name
(RefSeq) putative DEAD box RNA helicase
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lif
Leishmania infantum
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lif03041
]
LINJ_36_1920
03009 Ribosome biogenesis [BR:
lif03009
]
LINJ_36_1920
Enzymes [BR:
lif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LINJ_36_1920
Spliceosome [BR:
lif03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
LINJ_36_1920
Ribosome biogenesis [BR:
lif03009
]
Eukaryotic type
90S particles
Helicases
LINJ_36_1920
Pre-60S particles
LINJ_36_1920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
5073878
NCBI-ProteinID:
XP_001469774
UniProt:
A4IDF5
LinkDB
All DBs
Position
36:complement(725146..727122)
Genome browser
AA seq
658 aa
AA seq
DB search
MSARAPTSLWLGDHNDKAAVAAAEQSTKKRRRLRHHRCKAAREAASKTADGPYDELAETV
ENNDEVKSVEETPEAASNVASTKRSEKRRREDDSDDDEEADADATASSARPCNPQKRGAA
EGGKTSSPSASASPAASSSPNGPTAVSMTQRSKELAKSIPAVTDYKSLQLNPHIVSALEQ
EFKFKELTPIQSRCIPAALQGRDLLAEAKTGAGKTLAFLIPIVEIVCRSGFRPSNGTAAI
IIGPTRELCLQIEGVLLKLLKHFNGSLTFLCCIGGQSRNQEGFKLANGVMIVVASPGRLL
DHLKLTTDWHTKNLLLLAVDEADRVLDNGFEEDMREIVALLPKNRQTFLFSATQTTRVEQ
LARISFHKTPIFISMKSKKDKATVDTLEQGYVVCASEQRLLVLYHFVKKNLKKKVIVFFS
SRNSVSFHCELFNYIDVPCIAFHGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIPE
VDWIVQFDPPDDPVKYVHRVGRTARAGRCGNALMFLLPQEELFLKYLYDDAKVKVNEYTF
DLTRLKGNVQGQLEQLVSSNYYLRTSARQAYEGYLLSYSSCQLKNVFNIQNLDLAAVARG
FALSEPPPIKMDLSQSAAHMNKKSRHEFSAMRHTKDAKRRDVNAKSMNKRHQNISGEW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgagggcacctacgtcgttgtggttaggggaccacaacgacaaggctgcagtg
gctgctgcggagcagtccacaaagaagcgccgccgtcttcgccaccaccgatgcaaggcc
gcacgggaagctgcctcaaaaactgccgatggaccgtacgacgagcttgctgagacggtg
gagaataacgatgaagtgaagtcagtagaggagacgccggaggcggcgtctaacgtggcg
tccacgaaacgttcggagaagcgacggcgtgaggacgacagcgacgacgacgaagaggcg
gacgcagatgcgacggcatcgagcgcgcgtccgtgtaacccccaaaagcgcggcgcggcg
gagggagggaagacgtcatccccctccgcctccgcgtcccctgctgcgtcgtcgtcgccg
aacggccccacagcggtaagcatgacgcagcgcagcaaggagctggccaagtccatccct
gccgtcacggactacaagtcactgcagttgaacccccacatagtgtctgctctggagcag
gagttcaagttcaaggagctgacgccgattcagtctcgctgcattcctgctgcgctgcag
ggacgcgatctcctcgccgaggcgaagaccggcgccggtaagacgctggcgtttttgatt
ccaattgtcgagatcgtctgccgctctggcttccgccccagcaacggcacggcagccatc
atcatcgggcccacccgtgagctctgcttgcagatcgagggtgtgctgctgaagctgctg
aagcacttcaacggctccttgacgttcttgtgctgcattggtggccagagccgcaaccaa
gagggcttcaagctcgccaacggcgtcatgatcgtggtcgcctcccctggccgcctgcta
gaccatttgaagttgacgacggactggcacacaaagaacctactgctgctcgccgttgac
gaggcagatcgcgtgctcgacaacggctttgaggaggacatgcgcgagatcgtggccctg
ctgcccaagaaccgccagacgttcttgttttctgccacgcagacgacgcgtgtcgagcag
ctcgcgcgcatctcgtttcacaagacgccgatcttcatctccatgaagagcaagaaggac
aaggccaccgtggacacgttggagcagggctacgtcgtgtgcgccagcgagcagcgtctg
ctcgtgctctaccactttgtgaaaaagaacctgaagaagaaggtcatcgtcttcttcagc
agccgcaacagcgtcagcttccactgcgagctcttcaactacatcgacgttccctgcatc
gccttccacggcaagcaaaagcagcaccagcgctccgcgacgtacatgcagttttgcaac
gcaccgagtggcgtgctcttcacaaccgatgtcgcggcacgcggtctcgacattcccgag
gtggactggattgtgcaattcgaccccccggatgatccggtgaagtacgtccaccgtgtc
gggcgaaccgcgcgcgctgggcgctgtggtaacgcgctcatgtttctgcttccgcaggag
gaactgttcctcaagtacctctacgatgatgccaaggtgaaggtgaacgagtacaccttt
gatttgacaaggctaaaagggaacgtgcaggggcagctggagcagctggtgagctccaac
tactacctgcgcacttcggcgcggcaggcatacgagggctacttgctgagctacagtagc
tgccagctgaaaaacgtgttcaacatccaaaacctcgacctcgctgcggtggcgcgcggg
tttgcactgagtgagccgccgccgatcaagatggacctctcccagtctgctgcacacatg
aacaagaagtcgcgacacgagtttagcgccatgcgccacaccaaggacgctaagcgacgc
gacgtgaacgcgaagtcgatgaacaagcggcatcagaacatcagtggggagtggtga
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