Leishmania infantum: LINJ_36_5120
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Entry
LINJ_36_5120 CDS
T01112
Name
(RefSeq) putative exosome-associated protein 4
KO
K12587
exosome complex component MTR3
Organism
lif
Leishmania infantum
Pathway
lif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LINJ_36_5120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lif03019
]
LINJ_36_5120
Messenger RNA biogenesis [BR:
lif03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
LINJ_36_5120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
5073992
NCBI-ProteinID:
XP_001469886
UniProt:
A4IDR7
LinkDB
All DBs
Position
36:complement(1881659..1882324)
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AA seq
221 aa
AA seq
DB search
MKRADGRESPRAVRAIHVATNVLANCHSSACVEIGKTRVLCGVRPPQHLVQEYRGTRGRV
SCQVHRSLASSSNLDNSGDRDMALALEGVAEQAVVLERIPQLLVGALIEVVHDDGAVWDA
ATTALCVALTAGGVEVYDTFSACSAALRRDGAIIVDLTREEAATAMASVVVCSGLSLGGV
YYCCHKGACEATTMSQLVQAATKGLQVRKVPLLEQIRNQLV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagctgacggtcgcgagtctcctcgggcggtgcgcgccattcacgtcgccacc
aacgtgctggccaactgccacagcagtgcctgtgtcgagattggcaagacgcgcgtcctg
tgcggtgttcgcccgccgcagcatctggttcaggaataccgcggcacgcgcggacgtgtc
agttgccaagtccaccgcagtttggcctcctcgtcgaaccttgacaactctggtgaccgc
gacatggcccttgcgctggagggagtcgcagagcaagccgtggtgctggagcgcattcca
caactgctggtgggggccctaattgaagtggtgcacgacgacggggctgtatgggatgcc
gcaacgacggccttgtgcgtcgctctcacggcaggtggcgtggaggtctacgacaccttt
tcggcgtgcagcgccgcattgcggcgcgatggtgccataattgtcgacctcacgcgagaa
gaggcggcgacggcgatggcgagcgtggtagtgtgcagcggcctctccctcggcggcgtg
tactactgctgccacaaaggcgcgtgtgaggcaacaacgatgagccagctggtgcaggcg
gcgacgaaggggctgcaggtgcgcaaggtcccgctcttagagcaaatccggaaccaacta
gtctag
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