Limnohabitans sp. 63ED37-2: L63ED372_00101
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Entry
L63ED372_00101 CDS
T04121
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih00521
Streptomycin biosynthesis
lih00523
Polyketide sugar unit biosynthesis
lih00525
Acarbose and validamycin biosynthesis
lih00541
Biosynthesis of various nucleotide sugars
lih01055
Biosynthesis of vancomycin group antibiotics
lih01100
Metabolic pathways
lih01110
Biosynthesis of secondary metabolites
lih01250
Biosynthesis of nucleotide sugars
Module
lih_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
L63ED372_00101 (rfbB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
L63ED372_00101 (rfbB_1)
01055 Biosynthesis of vancomycin group antibiotics
L63ED372_00101 (rfbB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
L63ED372_00101 (rfbB_1)
00525 Acarbose and validamycin biosynthesis
L63ED372_00101 (rfbB_1)
Enzymes [BR:
lih01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
L63ED372_00101 (rfbB_1)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ALK87330
UniProt:
A0A0P0M6Q5
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Position
116936..117994
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AA seq
352 aa
AA seq
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MTILVTGGAGFIGANFVLDWLAASDEPVVNLDKLTYAGNPETLAILQGDARHQLVQGDIG
DSALVSRLLAEHRPRAVVNFAAESHVDRSIHGPGEFIQTNIVGTFNLLEAVRGFWGDLPA
TEKSAFRFLHVSTDEVYGSLAKGDPAFTETHRYEPNSPYSASKAASDHLVRAWHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGMQIRDWLYVKDHCSAIRRVLE
AGRLGEVYNVGGWNEKPNIEIVQTICQLLDEMRPKADGGSYASQITYVTDRPGHDRRYAI
DARKLEAELGWKPAETFETGIRKTVEWYLANPEWVQHVQSGAYREWVNKQYA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccattttggtgaccggcggcgcaggttttattggcgccaacttcgtgctcgactgg
ctggctgccagcgatgagcctgtcgtcaacctcgacaagcttacctacgcgggcaacccc
gaaaccttggccatcctgcaaggcgatgcacgccaccagctggtgcaaggcgacatcggc
gacagcgccctggtcagccgcctgctggccgaacaccggccgcgtgcggtggttaacttc
gcggccgaaagccatgtggaccgttccatccacggcccaggcgagttcatccagaccaat
atcgtgggcaccttcaacctgctcgaagcggtgcggggcttttggggcgacttgcccgcg
actgaaaaatcggccttccggtttttgcatgtgtccaccgacgaggtctacggctcgctg
gccaagggcgatccggctttcaccgaaacccaccgctacgagcccaacagcccctacagc
gcgagcaaggccgccagtgaccacctggtccgcgcctggcaccacacctatggcttgccg
gtgctcaccaccaactgcagcaacaactacgggccctaccacttccccgaaaaactcatc
ccgctcatgatcgtcaacgccttggcgggcaagcctttgcctgtgtatggcgacggcatg
caaatccgcgactggctctacgtcaaagaccactgcagtgcgattcgccgcgtgctcgaa
gccgggcgcttgggcgaggtctacaacgtgggcggctggaacgaaaagcccaacatcgag
atcgtgcagaccatctgccagttgctcgacgagatgcgccccaaagccgatggcggcagc
tacgccagccagatcacctacgtgaccgaccgccccggccacgaccgccgctacgccatc
gacgcccgcaagctcgaagccgagctgggctggaagcccgccgaaacgtttgagaccggt
atccgcaaaaccgtcgagtggtacctggccaatcccgagtgggtgcagcatgtgcaaagc
ggtgcttaccgcgagtgggtgaacaagcagtacgcttga
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