Limnohabitans sp. 63ED37-2: L63ED372_00175
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Entry
L63ED372_00175 CDS
T04121
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lih
Limnohabitans sp. 63ED37-2
Pathway
lih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L63ED372_00175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lih03400
]
L63ED372_00175
Enzymes [BR:
lih01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
L63ED372_00175
DNA repair and recombination proteins [BR:
lih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L63ED372_00175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALK87404
UniProt:
A0A0P0M6Q1
LinkDB
All DBs
Position
194639..195562
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AA seq
307 aa
AA seq
DB search
MSDPTRFDLDDRQRAMLAEMGVRVWWPQRSDAEPHAVVEVVPARATDTAVPAPGEYVAAS
PSLPAAPRASVPVQAPATRPATREPLALAPAPVQAKDPVLAPLPEGLPSMGWLELQTAVQ
SCQSCGLGAARQTPILGSGQGTAPWMVVGDLPSDTDEPSGQPFTGPEGVLLDNMLKAVGV
RRQGSAHNANADANALADLPEACLTHAVKCRPQNGRNPETSELATCAAYLSRQVTLVQPR
VILAMGRFAIQSLLGSTEPMGKLRGRLHDFQGVPVVVTYPPSSLLRNPADKAKAWADLVL
ALSVTQG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccccacccgatttgacttggacgaccgccaacgcgccatgctggccgagatg
ggtgtgcgcgtgtggtggccgcagcgaagcgatgccgagccccacgctgtggtggaagtt
gtaccggccagggccacagatacggcagtgccagcaccgggtgagtacgtcgctgcaagc
ccttctttgcctgcggctccgagggcgtccgtgccagtgcaggccccagccacccgcccc
gcaacgcgtgagcctttggcgctcgcacccgccccggtgcaggccaaggaccccgtgttg
gcgcctttgcccgaaggcttgcccagcatgggctggctcgagctgcaaacggctgtgcaa
tcctgtcagtcctgcggtctgggcgctgcacgccaaacccccattttgggctcgggccag
ggcactgccccatggatggtggtgggcgacttgccttcggacaccgatgagccctcaggt
cagcctttcactgggccggaaggcgtgttgctggacaacatgctcaaagccgtgggcgtg
cgccgccagggctcagcccacaacgctaacgccgatgccaatgcccttgccgacctgccc
gaggcttgcctgacccacgccgtcaaatgccgcccccaaaacgggcgtaaccccgaaacg
tcggagttggccacgtgcgcggcttatttgtcgcgccaggtcacgctggtgcaaccccgg
gtgattttggccatgggccgttttgccatccagagtctgttgggcagcaccgagcccatg
ggcaaactgcgcggccgtttgcacgactttcagggcgtaccggtggtggtcacctacccc
ccgtcaagcttgttgcgcaacccggccgacaaggccaaggcctgggccgatctggtcttg
gccctgtcggtgacccaaggctga
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