Limnohabitans sp. 63ED37-2: L63ED372_00288
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Entry
L63ED372_00288 CDS
T04121
Symbol
rpiR
Name
(GenBank) HTH-type transcriptional regulator RpiR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lih03000
]
L63ED372_00288 (rpiR)
Transcription factors [BR:
lih03000
]
Prokaryotic type
Helix-turn-helix
Other families
L63ED372_00288 (rpiR)
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Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
HTH_IclR
MarR
TetR_N
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ALK87517
UniProt:
A0A0P0M780
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All DBs
Position
complement(311744..312589)
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AA seq
281 aa
AA seq
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MLDRIKASLPSLAPAEQRVGKLVLADPRAFANLPVTELADRAHVSKPTVVRFCRSVGYDG
LSDFKLKLAGSVSEGVPFIHRSVDVDDKTSDIAVKVIDNTVAAFLKYRNDASSFALEHAA
QALAATQKTNRRIEFYGVGNSGIVAQDAQHKFFRLGVNAIAYSDGHMQVMSASMLKPGDC
AVIISNSGRTRDLMDACDIAKKQGATTIVITASGSPLASAGHIHLTADHPEGYDKYSPMV
SRLLHLLIIDILATTVALRIGEELQPVLRDMKKNLSSKRYT
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgcatcaaagcctctttgccctccctggctccagccgagcaacgcgtgggc
aagctggtcttggccgacccacgggcctttgccaacttgcccgtcacggagttggccgac
cgggcgcatgtgagcaaacccaccgtggtgcgcttttgccgcagtgtgggttacgacggt
ttgtccgacttcaaactcaagctggccggcagtgtgagtgaaggtgtgcccttcattcac
cgcagcgtggatgtggacgacaaaaccagcgacatcgcggtcaaagtcattgacaacacc
gtggccgcgtttttgaagtaccgcaacgatgccagctctttcgcgctggagcatgccgca
caagcactggccgccacgcaaaaaaccaaccgccgcatcgagttttacggcgtgggcaat
tccggcatcgtggcgcaagacgcacaacacaaattcttccgcctgggtgtgaacgccatc
gcctacagcgatggccacatgcaggtcatgagcgcctccatgctcaagccgggtgactgc
gcggtgatcatttccaactcgggccgcacacgtgacttgatggacgcctgcgatatcgcc
aaaaaacaaggcgccaccaccatcgtcatcaccgccagcggctcgcctctggccagcgcc
gggcacatccacctcacggccgaccaccccgagggctacgacaaatacagccccatggtc
tcgcgcctgctgcacctgctcatcatcgacatcttggccaccaccgtggccttacgcatc
ggcgaggaactgcagcccgtgttgcgcgacatgaagaaaaacctgagcagcaaacgttac
acctga
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