Limnohabitans sp. 63ED37-2: L63ED372_00379
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Entry
L63ED372_00379 CDS
T04121
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lih03019
]
L63ED372_00379
Messenger RNA biogenesis [BR:
lih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L63ED372_00379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_28
AAA_33
AAA_16
AAA_29
SKI
AAA_22
AAA_23
DUF7514
FtsK_SpoIIIE
Integrase_1
Motif
Other DBs
NCBI-ProteinID:
ALK87608
UniProt:
A0A0N7J8A0
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Position
complement(399935..400792)
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AA seq
285 aa
AA seq
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MDIILITGMSGSGKSVALHALEDAGYYCVDNLPPELLIPFVKLEEQHKEQRLAIAIDVRS
ANSLHLMPEQMNLLRDMGMSVKSVFLDANLDTLQRRYSETRRKHPLSGGSKPQSDKALLE
TIQLERDLLCDLRERAHVIDTSLLRSAQLQTYIKTLVSTPSAQLTLVFESFGFKRGIPTD
ADYVFDVRMLPNPHYESTLRPLTGRDEPVQAYLRQSEEFVQMQQQIEGFLKQWIPAIERD
HRSYVTVAIGCTGGQHRSVFMVELLAQNFSERWLTLKRHRELDAL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatcctcatcaccggcatgtccggctccggcaaatcggtggcgctgcacgcg
ctcgaggacgcaggctattactgcgtggataatttgccgcccgagctgctcatccccttc
gtcaaactcgaagaacagcacaaagagcaacgcctggccattgcgatcgatgtgcgcagc
gccaattcattgcacctgatgcccgagcaaatgaacctgctgcgcgacatgggcatgtcg
gtgaaatcggtgtttttggacgccaatttggacaccttgcagcgccgctattcagaaaca
cggcgcaagcaccctttatcaggcggcagcaaaccacaaagcgacaaggcgctgctggaa
accatccagctggagcgggatctgctgtgcgatttgcgtgagcgggcacacgtcatcgac
accagtttgctgcgttcggcccagctgcaaacctacatcaagaccctggtcagcacccca
tcggcccaactgacgctggtctttgaatcctttggcttcaagcgcggcatcccgaccgac
gctgactatgtatttgatgtgcgcatgctgcccaacccgcattacgaaagcacgttgcgg
cctctgaccgggcgcgacgaaccggtgcaagcctacctgcgtcaatccgaagaattcgtg
cagatgcagcagcagatcgaaggttttttgaagcagtggattcccgccatcgaacgtgac
caccgcagctacgtgacggtggccattggctgcaccggaggccagcaccgctcggtcttc
atggtcgagctgctggcccaaaacttcagcgaacgttggctcaccctcaaacgccaccgg
gagctggacgcgctttga
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